Protein

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Genbank accession
YP_010658347.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIRRAVRNIVSTIKKAALDSSTVAYVNAVIAAGYTPGYSFTRDVDTLIKALKAGVTPPWDNYDVIMLYAVPDKKACLDLKTPTRAVSEFNSPTFTADRGYSGNGTNSYTQFSPAYNPGLGGALLTQNDMHIGVYSLTAGANGNYHFGTTFTNTIRVKGRTDTNSGASLAVATGISSTGTHGMPVHAVGIRRSSTTQRIFVEGIQSNSSAVNSSALASASWGALRTNSSDYSTAQVAIVHAGKAHSDDQALQEHNAMKEYLRARGAL
Physico‐chemical
properties
protein length:267 AA
molecular weight: 28221,18410 Da
isoelectric point:9,49137
aromaticity:0,07865
hydropathy:-0,19551

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010658347.1
1 267
Domain Start End Length (AA) Confidence
N-terminal 1 129 129 0,0730
Central domain 130 256 128 0,0532
C-terminal 257 267 10 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-129
Central
130-256
C-terminal
257-267

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph16
[NCBI] 		2836132 Uroviricota > Caudoviricetes > Schitoviridae > Acanvirus > Acanvirus Rheph16
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010658347.1 [NCBI]
Genbank nucleotide accession
NC_070856 [NCBI]
CDS location
range 12362 -> 13165
strand +
CDS
ATGGCAATTCGTAGGGCTGTACGAAACATTGTATCCACAATCAAAAAAGCTGCTTTGGACAGCTCTACTGTTGCTTATGTTAACGCTGTTATCGCTGCTGGATATACACCAGGATACTCTTTTACGAGGGACGTAGATACTCTCATTAAAGCTCTCAAGGCAGGTGTCACACCTCCTTGGGATAATTATGATGTTATCATGCTTTATGCCGTACCAGACAAAAAAGCTTGTCTGGACTTGAAAACCCCTACCAGAGCTGTGTCGGAATTCAATTCCCCAACCTTCACTGCTGATAGGGGTTACTCAGGTAACGGTACTAACTCTTATACGCAATTCAGCCCTGCTTATAACCCAGGTCTGGGAGGAGCACTTCTCACCCAGAACGATATGCATATTGGTGTGTACTCTCTTACAGCAGGAGCCAATGGGAACTACCACTTTGGTACCACCTTCACCAATACGATTCGTGTGAAGGGTCGTACCGATACCAACTCGGGAGCAAGCTTGGCTGTAGCTACGGGGATATCCTCAACTGGTACACATGGCATGCCTGTGCATGCTGTGGGTATTCGTCGTAGCAGCACTACCCAACGTATTTTCGTTGAAGGCATACAAAGTAACTCTTCAGCAGTTAACTCGTCAGCTCTTGCTTCAGCAAGCTGGGGTGCTCTCAGGACAAACAGTTCTGACTATAGCACTGCACAGGTAGCTATCGTACATGCTGGCAAAGCCCATTCTGACGATCAAGCTCTACAAGAGCATAACGCTATGAAGGAATACCTTAGAGCCAGAGGGGCTCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2ae4a3b7230e5f8e8f07f9d31ec12d9d34d266e493d30c38a0c9a74691694a47
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8800
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank