Protein

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UniProt accession
A0A6G8RDB1 [UniProt]
Protein name
Receptor-binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,93
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSFFAGKFSDGKTVLSLNAANGGDTGEHYSPNTNSIFHSDMPFVLVDGTYEAALGNAGNGYFVTQMPWDIINIKSNDPGRVILTAIEINGTHRGFLNGTQSQVGQFLSFFEDPPRAGAELSVTSAFAIGDSLAHGTYIYNGGLGHEESIARQGSGGSLLQSSGFQIFRPGGVPAGEAIARAWSLMGFPTGVSTVPLNGGNADYWDPNWQAPIGSAGRGHDWFYVCSSNIRGFAGKKGVLPDNVNINYQSPSFPTKVYVCRGSTTNMAAQATRKVYVQDWYNVTPTKVIWYVLNLRYSNGSMGVSGNPFTGSDILISPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYVGNNAAYTGVFGDNTARCEFIGSSNGGLWSPVNYGGAASQISLYKFGVGKQWYVDTNTNSIGNEHGPVWSPSTVPLRLFPGNVASTYVGDDITPSYPGAGDFYTPLATVWLGLPNAHSTVILTTEVIMGNLNTAGMPVRTYGGSAWQVQGRRQQSYTAGDGVFHQILTLPPGYLVPYHSTTSYSYTQTWASRPDEFAFRRNGYIYTIKNLGNGNVELGVIIHAAEAAAVFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:593 AA
molecular weight: 63827,43980 Da
isoelectric point:6,83201
aromaticity:0,12479
hydropathy:-0,17858

Domains

Domains [InterPro]
IPR059609
RBD
1–593
IPR059609
A0A6G8RDB1
1 593
Architecture
RBD
RBD 1-593
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A6G8RDB1
1 593
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5405
Central domain 11 259 250 0,6975
C-terminal 260 593 333 0,6531
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-259
C-terminal
260-593

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage bombadil
[NCBI] 		2713285 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus bombadil
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
fcbaacc3b504bdb4f5c7e440ffb6bbd193d447e25dc337f1eabb9882b120d928
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2565
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50