Protein

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Genbank accession
UFK26865.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,61
Protein sequence
MGLVSQSVKNLKGGISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQEQYFVGFSGTGLAVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTNPSYPRLDGRAIINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQLTATLGGSGWSFQAGTGWILINAPANDNIRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKVWKETAKPKIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGAAINDVFFFRNRLGFLSGENVVMSRTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSNGILSSKTIELDLTTEFDVSDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFLYLDEILQQQSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKTIVLGAYNIDTNLTSFDVRTAYGGTPGPESTFYTIDQQGVLIEHEARDWATNPYISFVGNRAGEQMVIGKQYTFQYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQRVLGELSVGTGQFKFPVTGNAVNQRVTITSSNPNPLNVIGCGWEGNYIRRSSGI
Physico‐chemical
properties
protein length:808 AA
molecular weight: 88856,41950 Da
isoelectric point:5,65528
aromaticity:0,11139
hydropathy:-0,27153

Domains

Domains [InterPro]
IPR058003
TTP
1–808
IPR058003
UFK26865.1
1 808
Architecture
TTP
TTP 1-808
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UFK26865.1
1 808
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9895
Central domain 142 340 200 0,3065
C-terminal 341 808 467 0,1891
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-340
C-terminal
341-808

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Pst_GIL1
[NCBI] 		2895571 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pathovar tomato
[NCBI] 		4081 Streptophyta > Magnoliopsida > Solanales > Solanaceae > Solanum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UFK26865.1 [NCBI]
Genbank nucleotide accession
OK523999 [NCBI]
CDS location
range 24798 -> 27224
strand +
CDS
ATGGGACTCGTTTCGCAATCCGTCAAGAACCTCAAAGGAGGTATCTCGCAACAACCAGACATCCTTCGGTTCTCCAACCAAGGCGCTCTGCAAATCAACGGGTGGTCCTCGGAGACTCAAGGTCTTCAGAAGCGTCCACCAACCACCTTCACCAAGCGACTCCAGAACAAGGGTTTCCTCGGCACCAAGCCGCTGGTTCACCTCATCAACCGGGACGCCCAAGAGCAATACTTTGTGGGCTTCTCTGGGACTGGTCTGGCAGTCTGGGACCTGAAGGGCAACAACTACACCGTGCGTGGCTACAACGGTTACGCCAACTGCGCCAACCCTCGGACTGACCTGCGACTCATCACCGTGGCCGACTACACCTTCGTGGTTAACCGGAACACCGTGTGCCAGATGGGATCGACTCTGACCAACCCTTCGTACCCACGGCTGGACGGTCGAGCGATCATCAACGTTCGTGGTGGCCAGTATGGTCGTACCCTGTCGATCACCATCAACGGTGACGGCACTGGGTCCAGTCCTCAAGCGTCCATTAAGATGCCCAACGGGTCTGCCGAGAAGGTGCCCGCTGGTGACCCATACGCTGGCATGAACCAAGTGGACATGACAGATGCCTCATGGATCGCCGCTGAGCTGGCTCGGCAACTTACAGCCACTCTGGGAGGCTCTGGGTGGTCGTTCCAAGCAGGCACCGGGTGGATTCTCATCAATGCCCCTGCCAACGACAACATCCGCCAGATCGCAACCAAGGACGGCTACGCTGACACCCTGCTCAGTGGGTTCATCTATCAGGTCCAGACCTTCACGAAGCTCCCTGCGAACGCCCCACCGGGTTACCTCGTGGAGATCACTGGTGAGTCTGCCCGTTCGGGTGATAACTACTGGGTCCAATACGACGCCTCTGGGAAGGTCTGGAAGGAGACAGCGAAGCCCAAGATCATCGCAGGGTTCAACAACGCAACGCTCCCACACGCGCTCGTGAGGGCCGCTGACGGGCAGTTCGACTGGACACCTCTGACGTGGGATGGACGCAACGCTGGTGACGATGACACGAACCCAATGCCGTCCTTCGTGGGCGCTGCGATCAACGACGTGTTCTTCTTCAGGAACCGTTTGGGTTTCCTCTCTGGTGAGAACGTCGTGATGTCTCGGACCTCGAAGTATTTCAACTTCTTCCCGAGCAGCGTGGCGACCTTGAGTGATGACGACCCAATCGACGTGGCCATCTCGCACAACCGTATCTCGATCCTGAAATACGCTGTGCCGTTCTCTGAGCAGCTCCTGCTGTGGTCCGACCAAGCTCAGTTCGTTCTGTCGAGCAACGGCATCCTGTCGAGCAAGACCATCGAGCTGGACCTGACCACTGAGTTCGACGTGAGTGATGGTGCCCGTCCCTATGGGATTGGTCGCGGGGTTTACTTCGCAGCTCCACGGGCCTCCTTCACGTCCCTCAAACGGTACTACGCGATTCAGGATGTCTCTGACGTGAAGTCCGCTGAGGATGTCTCTGCGCACGTTCCGAGCTACATCACGAACACCGTCCACGCGATCCACGGGTCTGGTACTGAGAACTTTGTGAGCATCCTTTCGGACGGCTCGCCGAACAAGGTCTTCATCTACAAGTTCCTGTACCTCGACGAGATTCTCCAGCAGCAGTCCTTCAGTCACTGGGAGTTCGGTGATGCGGCCACAACCCGTGTCCTCGCAGCCTCGTGCATTGGCTCCTACTGCTACCTGATGATCGACCGTCCAGAGGGCCTGTGCCTTGAGCGCATGGAGTTCACGCAACACACCATCGACTATTCCATCGAGCCTTACCGGACCTACATGGACATGAAGAAGACCATTGTCCTCGGTGCCTACAACATCGACACGAACCTGACTTCGTTCGACGTTCGGACTGCCTATGGTGGAACACCGGGTCCTGAGTCCACGTTCTACACCATCGACCAGCAAGGGGTTCTCATCGAACACGAGGCGCGGGACTGGGCGACCAATCCGTACATCTCGTTCGTGGGCAATCGGGCTGGCGAGCAGATGGTGATCGGCAAGCAGTACACCTTCCAGTACGAGTTCAGCAAGTTCCTCATCAAGCAGACCGCTGACGATGGGTCTACCTCGACCGAGGACATTGGACGCTTGCAGCTTCGCCGTGCGTGGCTGAACTACGAGGAATCTGGTGCCTTCGAGATCAACGTCAACAACGGCTCCAGTGAATTCGTCTACGTGATGACTGGTGGTCGCCTCGGGATTCAACGAGTCCTCGGTGAGTTGTCCGTGGGTACTGGTCAGTTCAAGTTCCCTGTGACCGGCAATGCCGTAAACCAACGAGTCACCATCACCAGCTCCAACCCGAACCCACTCAACGTGATCGGATGCGGCTGGGAGGGTAACTATATCCGCCGTTCTTCCGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0753bc0b137766fa5ac6439d5c3443c6ef54bf00e734d6adeb68562f9c4e71fd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3039
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50