Protein

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Genbank accession
ANO58051.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLNPSTDPDYNGKVNSPDAEYPNGSARDAAVENDPSATPLLAKKFNDDWGFDAALLAAAGLSASGDPDTAEDSQRLAALVALFGRPTFPSFADLVTAAQGGALDGVDQVGTVQHTSGGIGGDVFVKNGLTGTPNENLYDGGTFNDANGDTWVTKNNAPFLMSNFGVLPGLAAAATNAAAILKVEAFAKARATLMTPCRFEYEGGLFASTDPLPFIENTKFSGQGEGITTLTSTTSKNVVGVATTAAPLAYCGLSDLTIDGRSSLLPFPSDDEDGNALRLNQVSFSDFENLEIKNSIFNAVSIYNNSNDNMFSNLRISAVGKAGTLPAVWTMCGVFFEAGSSRNKIKGMWVNGARQYGVWVGARDADNRDNSIEDAWIAQTDADGVHIGDEATANKCIRPSLTNVNILAAGDFGLRAFHAGTGAVEGLTVNGGTVEDCVSGGVLLDTACSGSMVDGVVIKNNGATGVIDAGTDNTLGTNTVTGHATNLSLGSATRNRNTGSGETDGRTNPITPSVLFGGSSAGVTYSSQEGFMSVSGGVCRFGVRIVLTSKGSSTGPLTIGGLTFPNAPTGALGVPSLAVANVTFSGAPFGLILNNATEVSIFQQQSGSPTSPLTDADVSDTSEFYLEGSYKV
Physico‐chemical
properties
protein length:632 AA
molecular weight: 64941,96080 Da
isoelectric point:4,39788
aromaticity:0,07437
hydropathy:-0,07184

Domains

Domains [InterPro]
DC_0934
STR
1–414
DC_0934 IPR006626 IPR006626 IPR006626
IPR012334
STR
199–530
IPR012334
IPR011050
STR
208–482
IPR011050
IPR006626
Unmapped
282–304
IPR006626 IPR006626 IPR006626 IPR006626 DC_1378
ANO58051.1
1 632
Architecture
STR
RBD
STR 1-530 | RBD 531-631 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ANO58051.1
1 632
Domain Start End Length (AA) Confidence
N-terminal 1 175 175 0,9929
Central domain 176 487 313 0,9899
C-terminal 488 632 144 0,9869
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-175
Central
176-487
C-terminal
488-632

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage SFCi1
[NCBI] 		1852599 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shewanella fidelis
[NCBI] 		173509 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANO58051.1 [NCBI]
Genbank nucleotide accession
KX196154 [NCBI]
CDS location
range 19365 -> 21263
strand +
CDS
ATGCTGAACCCAAGCACAGACCCAGACTACAACGGCAAGGTTAACTCCCCCGACGCCGAATACCCAAACGGGAGCGCCAGAGATGCGGCGGTGGAAAACGACCCGTCCGCCACGCCGCTGCTGGCTAAAAAATTTAATGACGACTGGGGCTTCGATGCCGCACTCCTGGCAGCAGCGGGCCTGAGCGCTTCCGGAGACCCGGACACGGCGGAAGATTCACAGCGGCTCGCCGCGCTGGTGGCACTTTTTGGTCGGCCGACTTTCCCCTCTTTTGCTGACCTGGTTACGGCAGCGCAAGGGGGTGCGCTCGACGGCGTGGACCAAGTCGGGACCGTGCAGCATACGTCCGGCGGGATAGGAGGCGACGTGTTTGTTAAAAACGGCCTAACTGGGACGCCGAACGAAAACCTATACGACGGCGGGACATTTAACGACGCGAACGGGGACACATGGGTGACGAAGAACAACGCGCCGTTTTTGATGTCCAACTTTGGCGTGCTCCCGGGGTTGGCAGCAGCAGCAACAAACGCCGCCGCGATATTAAAAGTGGAGGCATTCGCAAAAGCGCGAGCGACGCTAATGACCCCGTGCCGCTTTGAGTACGAGGGCGGCCTGTTCGCGTCGACCGACCCGCTGCCGTTTATCGAGAATACGAAATTTTCGGGGCAAGGGGAAGGCATAACGACGCTAACAAGCACGACAAGCAAGAACGTGGTAGGGGTTGCGACGACCGCCGCGCCGCTGGCGTATTGCGGCCTGTCAGACTTGACGATAGACGGGCGGTCGTCCCTGCTGCCGTTCCCTAGTGACGACGAGGACGGAAACGCCCTGCGATTGAATCAGGTCTCGTTCAGCGACTTTGAGAATTTAGAGATAAAGAACTCTATCTTTAACGCCGTCTCTATCTACAACAACTCAAACGATAACATGTTCTCAAACCTCCGAATTTCTGCGGTAGGCAAGGCGGGAACGCTGCCTGCCGTCTGGACAATGTGCGGGGTGTTCTTTGAGGCAGGGTCTAGCAGAAACAAAATCAAAGGGATGTGGGTGAATGGGGCTAGGCAATACGGCGTTTGGGTGGGGGCACGGGATGCCGACAACCGGGACAACTCAATAGAGGACGCTTGGATCGCCCAGACTGACGCCGACGGGGTACACATTGGCGACGAAGCGACGGCGAACAAGTGCATACGCCCCTCACTAACCAACGTAAACATCCTCGCGGCGGGGGACTTCGGGCTGAGAGCGTTTCACGCAGGAACAGGAGCCGTCGAGGGGCTGACGGTCAACGGAGGGACGGTCGAGGACTGCGTGTCCGGAGGGGTGCTGCTCGACACTGCCTGCTCGGGGTCAATGGTCGACGGGGTGGTGATAAAAAACAACGGGGCTACGGGGGTGATCGACGCGGGGACTGACAATACCTTGGGCACTAACACCGTTACTGGCCACGCCACCAACCTGTCACTTGGGTCGGCCACTCGAAACCGGAACACAGGGTCGGGGGAAACGGACGGGCGCACCAACCCGATCACCCCTAGCGTATTGTTCGGCGGGAGCAGCGCGGGGGTCACGTATTCGTCGCAGGAGGGGTTCATGTCGGTATCAGGCGGCGTCTGCCGGTTCGGGGTCCGCATAGTACTCACCAGTAAAGGGTCGTCGACGGGGCCGCTCACTATTGGCGGGCTGACTTTCCCCAACGCCCCGACAGGAGCGCTAGGGGTGCCGTCGCTGGCGGTGGCTAACGTCACATTCTCCGGGGCTCCCTTCGGGCTGATATTGAACAACGCAACGGAGGTAAGCATCTTCCAACAGCAGTCCGGTTCCCCTACCTCCCCTTTGACGGACGCCGATGTGTCAGACACGTCCGAGTTCTACCTAGAGGGCAGCTACAAGGTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a6d996cae5e7992d7025a697927f66f7a09dfa590e04fceabb1ce944b50b6ea9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8618
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Cultivation and characterization of a phage-host system from the gut of Ciona intestinalis, a model for dissecting colonization dynamics Leigh,B.A., Karrer,C., Cannon,J.P., Breitbart,M. and Dishaw,L.J. 2017-03-22 — GenBank