Protein

View in Explore
Genbank accession
UOF81308.1 [GenBank]
Protein name
pectate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MATGISFIGAQGFGAGANGWREATAQILFVTNLNNSGAGSLRAAAATSGAKYIIFRIGGYVDFSSDLPCNSNTYIAGQSAPGDGVCARLAAGATKFELLAGTSHICIRHIAIRSQASAGANVNCLAIFSDQTIVDHCSFTWAEDDNVFYDEQGGALNITIQYCITAEGLRGKAILKNGLGSGNASIHHNYMAHCTSRFPSVHSGHNEIISNLSYNYGSTTAGWGGQADLGDFHTSQPSQFNWINNFFRFGPTSGQAGAPFASCFELLSSGETGTPAGIYLTGNKVQDGTASSITARISESGSRPGLPQQGSPYSFSPVVAVTQDSADSLAGLLLSSVGATKPARSAIDQAIVDSYAALTGDTMITSETQSRYGSFPSMPAGTATHLEPSGMTQEFITRMGLANTTASALSTSISTARGLGEPYQNLEWNLMEKAGDISPLVGSATSAKWGAAARRRKD
Physico‐chemical
properties
protein length:458 AA
molecular weight: 47647,30230 Da
isoelectric point:5,92412
aromaticity:0,08515
hydropathy:-0,09956

Domains

Domains [InterPro]
IPR012334
STR
4–302
IPR012334
IPR011050
STR
6–341
IPR011050
IPR052063
Unmapped
6–355
IPR052063
UOF81308.1
1 458
Architecture
STR
STR 4-341 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UOF81308.1
1 458
Domain Start End Length (AA) Confidence
N-terminal 1 34 34 0,3040
Central domain 35 285 252 0,9001
C-terminal 286 458 172 0,6273
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-34
Central
35-285
C-terminal
286-458

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudoviricetes sp.
[NCBI] 		2832643 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOF81308.1 [NCBI]
Genbank nucleotide accession
MW202742 [NCBI]
CDS location
range 1977 -> 3353
strand +
CDS
ATGGCGACGGGCATCTCGTTCATCGGCGCGCAGGGCTTTGGAGCTGGGGCCAACGGCTGGCGGGAGGCAACGGCGCAAATCTTGTTCGTGACCAACCTGAACAACAGCGGTGCGGGGAGCCTCCGCGCAGCAGCCGCGACGAGTGGGGCGAAGTACATCATCTTCCGCATCGGCGGCTACGTCGACTTTAGTTCCGATCTGCCGTGTAATTCCAACACCTATATTGCCGGGCAGTCGGCCCCTGGAGACGGGGTGTGCGCTCGATTGGCGGCGGGCGCGACGAAGTTTGAACTCCTGGCGGGAACCAGTCATATCTGCATTCGGCACATCGCCATTCGCAGTCAAGCGTCCGCAGGCGCGAATGTGAACTGCCTTGCCATTTTTTCCGACCAGACCATTGTGGACCATTGCTCTTTTACCTGGGCTGAGGATGACAACGTGTTCTATGACGAGCAAGGTGGAGCCCTGAACATCACGATCCAGTATTGCATCACCGCAGAAGGGTTACGCGGTAAGGCGATCTTAAAGAACGGCCTTGGTAGTGGGAATGCCAGTATCCATCATAACTATATGGCCCATTGTACGTCGCGGTTTCCTTCCGTCCATTCTGGGCACAATGAAATCATCAGTAACCTAAGTTATAACTACGGCTCAACCACGGCAGGGTGGGGCGGGCAAGCCGATCTGGGCGACTTCCACACATCACAACCCTCTCAATTCAACTGGATCAATAACTTTTTCAGGTTTGGACCAACAAGCGGTCAAGCGGGTGCTCCATTTGCTTCCTGCTTTGAACTTTTATCCAGTGGTGAAACGGGAACGCCTGCCGGTATTTACCTCACTGGAAATAAAGTGCAGGACGGCACGGCCTCGTCGATTACAGCGCGGATTAGCGAAAGCGGCTCACGTCCTGGTCTTCCTCAACAAGGCTCGCCGTACAGCTTTTCACCTGTTGTGGCGGTCACGCAGGACTCCGCTGATTCGCTCGCGGGTTTACTGTTGTCGAGCGTCGGGGCCACAAAGCCTGCCCGGAGCGCCATCGACCAAGCGATCGTGGACAGCTATGCCGCCTTGACTGGCGACACCATGATTACCTCAGAGACGCAATCGCGGTATGGCAGTTTCCCTTCCATGCCAGCTGGGACCGCCACGCACTTGGAGCCGAGCGGCATGACCCAAGAGTTCATAACGCGCATGGGCCTTGCGAATACGACCGCCTCGGCGCTCAGTACCAGCATCTCGACGGCACGTGGATTGGGTGAACCATACCAGAATCTCGAATGGAATCTGATGGAGAAGGCGGGGGATATTAGTCCCCTGGTGGGTAGCGCGACCAGTGCTAAGTGGGGCGCGGCAGCACGGCGGAGGAAGGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9673e8ebd06567eede860793ac87a68ba8c0a04e6594ddfc3ba42ac96142104c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7080
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50