Protein

View in Explore
Genbank accession
QFR57265.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MLDKLNQPKGSTIGVLRDGRTLQEAIDDIITRQALDTTMYVKSREELLAAIQTVNTLVRKSTRIVLTRDFAPWNETADVDLTFVSLEGEGQATKIDCSGLQAGTRAVRFFTTNAASVGNISYQGGDKITNIQFFGPSQTGTTDGVLFENVASISVQGLTVMGFRDGVQIGSNAYIIHFYRIRIDRCGGVHLRVLNTPNTGEGIHLYGGTLSTSGGTLLQCDNPNSAIRAYGTSLDYAGAVAKANRGSIELLGCHMEFENGTNDLKEIPFQTTAAQDSRLLIDGGEILSYKGTTPISQQAVFYSVKGGAGITVRDTKLVYVNTQSGDIKQGDGQFIALNLKLFDNNGNVGIARGQAPTDSLAGDPTFTMSPPADWYIQQAVSEITDRWTSGTGTLVTNTDVKYSTEYGGSMEVTKIFGNGSNFTVRMEVPVTYLNEMTARLRIMAPAGTVGTIYMNLQFGRLRSYDSLGRPVFARSDTARQRSVDLSKSNGSWISALAPSGRITAPRWATHFIVSINMASLQPGTKFYIGETGVFTL
Physico‐chemical
properties
protein length:536 AA
molecular weight: 57911,57130 Da
isoelectric point:6,55583
aromaticity:0,08209
hydropathy:-0,16213

Domains

Domains [InterPro]
DC_1550
ATT
1–40
DC_1550 DC_1464
IPR011050
STR
15–209
IPR011050
QFR57265.1
1 536
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-209 | RBD 210-536
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QFR57265.1
1 536
Domain Start End Length (AA) Confidence
N-terminal 1 45 45 0,9732
Central domain 46 367 323 0,9857
C-terminal 368 536 168 0,9880
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-45
Central
46-367
C-terminal
368-536

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage AmPh_EK52
[NCBI] 		2653642 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Przondovirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFR57265.1 [NCBI]
Genbank nucleotide accession
MN434093 [NCBI]
CDS location
range 35720 -> 37330
strand +
CDS
ATGTTAGACAAACTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAGGGATGGGCGCACTCTCCAAGAGGCGATTGATGATATAATCACTCGACAGGCATTGGACACAACGATGTACGTAAAGAGCCGTGAGGAATTACTTGCGGCAATCCAAACGGTTAACACGCTGGTTCGTAAATCCACTCGAATAGTCCTGACTCGGGACTTTGCGCCTTGGAACGAAACAGCGGATGTCGACCTGACCTTTGTGTCTCTTGAGGGTGAGGGTCAGGCCACCAAGATTGACTGTTCTGGGCTTCAGGCAGGGACCCGTGCCGTGCGATTCTTCACGACCAATGCGGCCTCAGTGGGAAACATCTCGTATCAAGGTGGGGACAAGATTACTAACATCCAGTTCTTTGGTCCATCACAGACTGGTACAACGGATGGTGTACTGTTTGAGAACGTTGCGAGCATTTCTGTCCAAGGGTTGACCGTTATGGGATTCCGAGATGGTGTGCAGATAGGCAGTAACGCTTACATCATTCACTTCTACCGAATCCGTATAGACCGCTGCGGTGGGGTCCATCTGCGGGTTCTTAACACTCCGAACACTGGTGAGGGCATCCACCTATACGGAGGCACGCTGTCCACCTCAGGCGGTACGCTGTTGCAGTGTGATAACCCTAACTCAGCCATTCGTGCGTACGGCACCTCTCTGGACTACGCTGGGGCTGTTGCCAAGGCAAACCGTGGGTCAATAGAACTATTAGGTTGCCACATGGAGTTCGAGAATGGCACTAACGACCTTAAGGAGATTCCATTCCAGACTACAGCGGCGCAGGATAGTCGTTTGCTAATAGATGGTGGTGAGATTCTCTCTTACAAGGGGACCACTCCTATCAGTCAACAGGCGGTGTTCTACTCTGTCAAGGGAGGCGCAGGAATTACCGTACGAGACACCAAGCTGGTATACGTCAACACACAGTCTGGAGACATCAAGCAGGGCGATGGCCAGTTCATTGCGCTGAACCTCAAACTGTTTGACAATAATGGTAACGTAGGCATTGCCCGTGGTCAGGCACCTACCGACAGTCTGGCTGGAGACCCCACATTTACGATGAGCCCACCGGCTGACTGGTACATCCAACAGGCAGTCAGTGAGATTACGGACAGATGGACCTCGGGTACTGGCACTCTGGTCACAAACACTGACGTAAAATACTCCACGGAATATGGTGGTTCCATGGAAGTTACTAAGATTTTTGGTAATGGCTCAAACTTCACGGTTCGCATGGAAGTCCCTGTGACCTATCTTAACGAGATGACGGCTCGGTTGAGAATCATGGCCCCTGCTGGTACAGTCGGCACCATCTACATGAACCTACAGTTCGGTCGCCTTCGTAGTTATGACTCACTTGGTCGCCCAGTGTTTGCACGTTCTGATACGGCACGGCAGCGGTCAGTAGACCTGTCGAAATCCAATGGCTCGTGGATTAGCGCACTTGCCCCATCTGGTCGAATCACGGCACCTCGGTGGGCAACACACTTCATCGTCTCAATTAACATGGCAAGTCTACAGCCCGGCACTAAGTTCTACATCGGGGAGACTGGTGTGTTCACTCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f416ed0dbee8154b6d3fbcd04e670bd2961be7dc8859198336e4e43b012234cc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7982
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Klebsiella pneumoniae ST258 genomic variability and bacteriophage susceptibility Venturini,C., Ben Zakour,N., Bowring,B., Morales,S., Cole,R., Kovach,Z., Branston,S., Kettle,E., Thomson,N. and Iredell,J. 2019-05-05 — GenBank