Protein

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Genbank accession
QGJ84341.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,70
Protein sequence
MARQFSTVIEFIQYGKVNSNTFGAGVIEFEGFNSIGDGGATLWQREGTTGLTPSKTPTEFDDNRFTDAVGDLWVLVPSQIVTFNGVQFLPIPFGAAGNGGYYFNGTDFVFLANAADEAAAAAQSAADATASAQRAEDAAASIEGQLTTTQLIASSLTLDVGDTIQTNGFLTAGDGGGAQWLLTSETGTPSQTPADLGEAKLTDSGGRVWSLVGDFTMLSVGAIGDGVNDDSDYYYLLAESVGSGKLTFNDGHRFKIYHSLGEAGDGSEFVIQGSGDVYLSGEPDQTLRQQQPAAVKIYKKVSNSEGGGGILSMNFNGDPSESTMRNLSPFAVPDNVAVLGYSMRGVNGSNPIVASNFHGWFENNDSLVWVQEIDVQNEGATQTANDDSGGVGIVVNTGSTFSPSTGISIRRQTGAGTAPGFLRGIQIRGARDTGIEFEAMSASTYPDMNPQPNGKLNIIRSLASGDVNARYTVDESGRAYYGSGSAPQDIYTGRSASNRWSLYSTSGFPELSTVSTVTGTASVISEHSEYSENDAGSSIKYSFVRVTINSSSAGAESATRRFYNKRGGSDVEIMQLNDGLSMVGTNPGSGNIAADKFYSGTSQGATGSFTSSDGKTITVTGGIITSIV
Physico‐chemical
properties
protein length:628 AA
molecular weight: 65572,77180 Da
isoelectric point:4,39623
aromaticity:0,09076
hydropathy:-0,24268

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGJ84341.1
1 628
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,9768
Central domain 232 445 215 0,9673
C-terminal 446 628 182 0,9226
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-445
C-terminal
446-628

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage XCL1123
[NCBI] 		2655003 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas marina DSM 17587
[NCBI] 		1117316 Pseudomonadota > Gammaproteobacteria > Alteromonadales > Pseudoalteromonadaceae > Pseudoalteromonas > Pseudoalteromonas marina

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGJ84341.1 [NCBI]
Genbank nucleotide accession
MN313256.1 [NCBI]
CDS location
range 28077 -> 29963
strand -
CDS
ATGGCTAGACAATTTTCAACGGTAATTGAGTTTATTCAGTACGGTAAAGTAAACTCAAATACATTCGGTGCTGGCGTTATTGAGTTTGAAGGATTCAACTCTATTGGTGACGGTGGCGCGACATTGTGGCAGCGAGAAGGTACAACAGGCTTAACGCCATCTAAAACGCCAACTGAGTTTGACGACAATAGATTTACTGATGCTGTCGGCGATTTGTGGGTTTTAGTACCATCTCAAATAGTTACTTTTAACGGTGTGCAATTCTTGCCTATTCCATTTGGGGCGGCTGGTAATGGTGGATACTACTTCAACGGCACTGATTTTGTTTTTCTAGCCAATGCAGCAGATGAAGCAGCGGCGGCTGCACAGTCTGCGGCGGACGCTACAGCATCCGCTCAAAGGGCGGAGGATGCGGCGGCAAGCATTGAGGGGCAGCTAACAACAACACAGCTAATAGCTAGCAGCTTAACGCTTGATGTTGGTGATACCATTCAAACAAACGGATTCTTAACCGCTGGCGATGGTGGTGGTGCTCAATGGTTGCTAACATCTGAAACTGGTACACCTTCGCAAACCCCCGCTGATTTAGGTGAAGCAAAGCTTACGGATTCGGGTGGTCGAGTTTGGAGTTTGGTTGGTGATTTTACAATGTTATCAGTCGGTGCGATTGGTGATGGGGTTAATGATGATTCGGATTATTATTACCTGCTCGCTGAATCTGTGGGAAGTGGTAAGTTAACTTTCAATGATGGTCACAGGTTTAAAATATACCACAGTCTTGGTGAGGCTGGTGACGGTAGTGAATTTGTAATTCAAGGTTCTGGAGATGTTTACCTATCCGGTGAACCAGACCAGACATTGAGACAGCAGCAACCAGCGGCTGTAAAAATATACAAAAAAGTATCAAACTCCGAAGGTGGTGGTGGCATTCTCTCAATGAATTTCAACGGAGACCCTTCTGAGAGCACGATGAGAAACCTAAGCCCCTTTGCCGTGCCTGATAATGTTGCGGTACTAGGTTATTCGATGAGAGGTGTTAATGGCTCAAATCCAATAGTCGCATCAAATTTTCATGGGTGGTTTGAAAATAACGATTCGCTGGTGTGGGTTCAGGAAATAGATGTGCAAAACGAAGGTGCTACTCAGACGGCAAACGATGATAGCGGCGGTGTAGGTATAGTTGTAAATACTGGCTCTACGTTCTCCCCTAGTACCGGTATATCTATAAGAAGGCAAACGGGTGCCGGCACCGCTCCCGGTTTCTTGAGAGGCATCCAGATAAGAGGGGCTAGGGATACAGGTATAGAATTTGAAGCAATGTCTGCATCTACGTACCCTGATATGAATCCACAACCCAACGGTAAGCTAAATATAATAAGATCGCTTGCTAGCGGGGATGTTAATGCTAGGTACACAGTAGATGAAAGCGGGCGTGCATATTACGGAAGCGGTTCTGCTCCGCAGGATATTTACACTGGGAGGTCTGCTTCAAATAGGTGGTCATTATATTCAACAAGTGGGTTCCCTGAGTTGTCAACTGTTTCAACGGTAACTGGTACTGCTTCGGTAATATCAGAACACTCAGAATATTCAGAAAATGACGCTGGTTCATCTATAAAATACTCCTTTGTAAGGGTTACTATAAACTCGTCATCGGCAGGGGCAGAGTCGGCTACCCGTAGGTTTTACAATAAAAGAGGTGGCTCAGATGTTGAAATTATGCAGCTTAACGATGGCTTATCAATGGTGGGGACTAACCCAGGTAGTGGTAACATAGCAGCAGACAAGTTCTACTCGGGGACGAGTCAAGGCGCTACTGGGTCTTTCACAAGCTCAGACGGTAAAACTATAACTGTAACAGGCGGTATAATAACGTCGATCGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
74a5df2455df714a545cc9fe1d160225d43585259da39200587979135e7ecd2c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5456
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Pseudoalteromonas Phage XCL1123 from the Yellow Sea, China Xue,C. 2018-12 — GenBank