Protein

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Genbank accession
YP_010660045.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MAELKKLVRGVSTAGDIFDSVNGLIDADTLLNSSYYEQEQGKNLFDKSKAISGFIATNGTYYESGTYSVSEFIPVTVGESYYGSAGSDGMRFITAYDENQQAIQSAGVDSLSFLYVVPAGISFIRVTCNTQTINEFQLEQNSVKTSYEPFGYRRASVDQYRKEYPWAGYRLTTYGDSLTAQNRWQPTVASKTGAIHTNKGVGGSRITGADGSTTAICQTARINTIGTGEHIVIALGGTNDWAQSVPIGSIDDSDPLATFYGGLNRLYLNLTTRLPEARLLAGTPPYSEFIDFASRGWVNGATNNAGHVIDDYAEAVRIAANKWGLPVVDFNAECGWNEVNITTYVEDDGNLLHPNNKGATRMAEIAIYRMKQLKLISA
Physico‐chemical
properties
protein length:378 AA
molecular weight: 41157,23470 Da
isoelectric point:4,99537
aromaticity:0,10582
hydropathy:-0,27037

Domains

Domains [InterPro]
SSF52266
STR
165–372
SSF52266
IPR036514
STR
167–374
IPR036514
IPR013830
ENZ
174–359
IPR013830
cd00229
ENZ
175–364
cd00229
YP_010660045.1
1 378
Architecture
STR
STR 165-374 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage HS6
[NCBI] 		1357710 No lineage information
Host Pseudoalteromonas sp.
[NCBI] 		53249 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010660045.1 [NCBI]
Genbank nucleotide accession
NC_070820.1 [NCBI]
CDS location
range 15416 -> 16552
strand -
CDS
ATGGCAGAATTAAAAAAACTAGTACGCGGCGTTTCTACTGCTGGCGATATTTTTGACAGTGTTAATGGGTTGATTGATGCTGATACGCTTTTAAACTCAAGTTATTACGAGCAGGAACAAGGCAAGAATCTATTTGATAAATCAAAGGCTATCAGTGGATTCATAGCCACTAATGGAACGTATTATGAATCAGGTACGTATTCTGTATCTGAATTTATCCCTGTAACTGTCGGTGAATCATACTATGGTTCGGCTGGATCTGATGGTATGAGGTTTATAACCGCATACGATGAAAACCAACAAGCCATTCAGTCGGCTGGCGTTGATTCTTTAAGCTTTTTATATGTTGTACCAGCAGGCATTTCGTTTATAAGGGTTACTTGCAACACACAAACTATAAATGAATTTCAGCTAGAGCAGAATAGCGTAAAAACCTCTTACGAACCTTTCGGTTATCGCCGCGCATCTGTTGATCAGTACAGAAAAGAATACCCGTGGGCTGGCTATAGACTGACAACGTACGGCGATTCTCTAACAGCTCAAAACCGCTGGCAACCTACGGTAGCCTCAAAGACGGGTGCGATACACACTAACAAAGGTGTTGGCGGCTCAAGGATTACAGGTGCGGACGGTAGTACAACAGCTATATGCCAAACAGCAAGAATTAACACTATCGGAACTGGTGAGCACATTGTCATTGCCCTTGGTGGCACAAACGATTGGGCGCAAAGCGTGCCAATTGGAAGCATTGACGACTCAGACCCGTTAGCTACTTTTTACGGTGGGTTAAACAGATTGTATCTAAACCTAACGACTAGGCTGCCAGAGGCAAGGTTGTTAGCTGGTACACCTCCATATAGTGAGTTTATAGATTTTGCATCAAGAGGTTGGGTCAATGGGGCAACTAATAATGCAGGTCACGTCATTGATGACTACGCAGAAGCGGTAAGAATTGCTGCGAACAAATGGGGCTTACCTGTTGTGGATTTTAACGCAGAGTGCGGGTGGAATGAGGTGAATATAACTACATACGTAGAGGATGATGGAAACCTTCTTCACCCAAATAACAAAGGTGCCACAAGAATGGCGGAAATTGCGATTTACAGAATGAAGCAGTTAAAGCTTATTTCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
12cb3addc0a66524a46641edb932f1e8c0d8834ed60acf41c8ea900f753f75cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8388
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pseudoalteromonas phage genomics Duhaime,M.B. and Sullivan,M.B. 2010-07-08 — GenBank