Protein

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Genbank accession
YP_010762014.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MTIAIKRDNGDLIWFDAVTEFGRQYRGSVSSNPIETGGKITDHVTTENPVFTLTAIVSDADFNLNRPVINDNEAQTYKINNKEFVNTQPVSVPAVITTSRFDPSRIFPEVITQFIPPEIPSATVLPQKGDKVAYDIERQLIDMQRNAEVFSLLDFRDGIIWDQIERCIFTDLSFSENAETGQSIQPRMTIEAVTFTDTRYIEVRVNKGRKTAKKEKRDTKDGDTGASNATGQDSPTFKRSQMKEAQIRTQVAR
Physico‐chemical
properties
protein length:253 AA
molecular weight: 28544,66340 Da
isoelectric point:5,28093
aromaticity:0,07905
hydropathy:-0,54545

Domains

Domains [InterPro]
IPR048494
ATT
15–203
IPR048494
DC_1100
STR
26–253
DC_1100
YP_010762014.1
1 253
Architecture
ATT
STR
ATT 15-203 | STR 204-253
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaGz-1
[NCBI] 		2419748 Uroviricota > Caudoviricetes > Vandenendeviridae > Pakpunavirus > Pakpunavirus PaGz-1
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010762014.1 [NCBI]
Genbank nucleotide accession
NC_073603.1 [NCBI]
CDS location
range 37773 -> 38534
strand +
CDS
ATGACAATTGCTATCAAGAGAGATAACGGAGACCTGATTTGGTTCGATGCTGTCACTGAGTTCGGAAGACAATATCGTGGTTCTGTTAGTTCCAACCCTATTGAAACGGGAGGGAAGATCACAGACCACGTTACAACTGAAAACCCGGTGTTCACGCTCACTGCTATCGTATCCGATGCAGACTTCAACCTGAACAGGCCTGTTATCAACGACAACGAGGCTCAAACTTACAAGATCAACAATAAAGAGTTCGTGAATACTCAGCCGGTCAGTGTGCCGGCTGTTATCACAACTTCCAGATTTGATCCGAGCCGAATCTTCCCGGAAGTTATTACTCAGTTTATTCCTCCTGAGATTCCGTCCGCTACTGTCCTCCCTCAAAAGGGTGATAAAGTCGCTTATGATATTGAGCGCCAACTGATCGACATGCAGCGTAACGCTGAGGTCTTCAGCTTGCTGGATTTCAGAGACGGTATCATCTGGGATCAAATTGAGCGGTGCATCTTTACCGACTTGTCCTTCAGCGAGAATGCTGAAACTGGACAGAGTATTCAACCTAGAATGACTATCGAGGCCGTGACATTCACAGACACTCGCTACATTGAAGTTAGGGTGAACAAGGGAAGAAAGACAGCCAAGAAGGAAAAGAGAGACACCAAAGACGGTGATACAGGGGCTAGTAACGCCACTGGACAAGATTCTCCTACATTCAAGCGTAGCCAGATGAAAGAGGCTCAAATTAGAACTCAAGTTGCGAGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8effa65038bfd001ba9591dca7a051e464ddd19ae655d9ee0c1af9b10ccdb2b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7318
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
PaGz-1, Complete genome sequences of 3 novel enterobacteria, Pakpunavirus like phages Yuan,S., Ma,Y. and Liu,Q. 2020-07-27 — GenBank