Protein

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Genbank accession
WMM95027.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,60
TSP
Evidence RBPdetect2
Probability 0,82
Protein sequence
MSNARDKANIPALNFSSTGIDDNATSTAITIDSNQRVGIGTSPNPNSKLNVRTSNDRNLYIRDGYRTAGGIAIQTVNNAENANVPLELNADAQTLLLSGTPITFTNSGTERMRITSSGNVGIGTSSPNNILELSKSNAGAATSIIVRNSNGVSTLGNKAELHLGNTNSLTHGARISADFVGTPLANHKTDLIFSTTTSGSVLTEAMRIDGSGNVGIGETAPLGKLHVNTADSGLTPHANADDLFVEGSTHSGITIGSGTSSSGNIYFGDSADNSIGRISYNHSANRMDFMNNGRNSFYMQNYLNISLNTSTYTVIDSIPFGAYLAVIGEANNNTSREVWLLLRIGAAYSVGATRLLQRTATGGGDNRTFDVRGTTAGNLEAKLTAGSSMTNCEVTLFKFGM
Physico‐chemical
properties
protein length:401 AA
molecular weight: 41977,81080 Da
isoelectric point:6,16666
aromaticity:0,05486
hydropathy:-0,25287

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM95027.1
1 401
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0061
Central domain 11 209 200 0,0829
C-terminal 210 401 191 0,9522
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-401

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC304P
[NCBI] 		3072839 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter
[NCBI] 		198251 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95027.1 [NCBI]
Genbank nucleotide accession
OR420736 [NCBI]
CDS location
range 34578 -> 35783
strand +
CDS
ATGAGTAACGCAAGAGATAAAGCTAACATACCTGCACTTAACTTCTCATCTACTGGTATAGATGATAATGCTACAAGTACAGCTATTACTATAGATAGTAATCAAAGAGTTGGTATTGGTACTTCTCCAAATCCTAATTCAAAATTAAATGTTAGAACTTCTAATGACAGAAATTTATATATTAGAGATGGCTATAGAACTGCAGGCGGAATAGCAATTCAAACAGTAAATAATGCTGAAAATGCAAATGTACCTTTAGAATTAAATGCTGATGCTCAAACACTTTTATTATCAGGAACTCCTATTACTTTTACTAACAGTGGTACAGAACGTATGCGTATTACTAGTTCTGGTAACGTAGGTATTGGTACAAGTAGTCCAAATAATATATTAGAATTAAGTAAATCTAATGCTGGTGCAGCAACTTCTATAATAGTTAGAAATTCAAATGGTGTTAGTACATTAGGTAACAAAGCTGAACTACATTTAGGAAATACTAATTCACTTACTCATGGTGCTAGAATTTCAGCAGATTTTGTTGGAACTCCTCTTGCTAACCATAAAACAGATTTAATTTTTTCTACAACTACTTCAGGTTCTGTTTTAACAGAAGCTATGCGTATTGATGGTTCTGGCAACGTAGGTATTGGTGAAACAGCACCTTTAGGAAAACTTCATGTAAATACAGCAGATAGTGGATTAACACCTCATGCAAATGCAGATGATTTATTTGTAGAAGGAAGCACTCATTCAGGAATTACTATTGGTTCTGGCACATCTAGTTCTGGAAACATATATTTTGGAGATAGTGCAGATAATAGTATTGGAAGAATAAGTTACAATCATTCTGCTAACAGAATGGATTTTATGAACAATGGTAGAAATTCATTTTATATGCAGAATTATTTAAATATTAGTCTAAATACCTCAACTTATACAGTTATAGATAGTATTCCTTTTGGTGCGTATTTAGCTGTGATTGGTGAAGCAAATAATAATACTTCAAGAGAAGTTTGGTTATTATTAAGAATTGGTGCTGCTTATTCTGTTGGTGCAACAAGATTATTACAAAGAACAGCAACAGGTGGTGGTGACAATAGAACTTTTGATGTTAGAGGAACTACAGCAGGAAATTTAGAAGCAAAATTAACAGCAGGAAGTTCAATGACTAACTGCGAAGTAACTTTATTTAAATTTGGAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
abe0c33b0b2a8e5743ca5f0db5c9aa11d5afd1fa76eec13330ee4004f2b813d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6675
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50