Protein

View in Explore
Genbank accession
YP_010082887.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQKPNLLEDKPTINADENIWGIKLNKIIDKLQVFVNSIVESVSGKLDKGNVSSNFDTAEKIENEIKNKVSQEDFDRNISDIGDKQRETDNFIQDFQNKSYVYHQSKELYDNQGKITDLIISNLTVESLNGNSVGGSLSEEQIKTICSKYYEPKFNKKSGWNLDISSDENSNSDSVIASTKLVYNIKENSINKDYLTKLPQQLSIDGNILKYKVEQGGRFIDKELNLPSSVTENWANERFEPIIEEKKTGFNKDKSDDYNLGDSNILATTKATKNLSESLDKVVKDISISEGKLKYKEGLVGLSKELELPSGSGGGSVPINTMLYTSQQKMETSTGLPIKNINIESINDKKIEDLTKVEGLYTHKELVDLSESNYEKFKDEIPYFDTFDLKIVTRSKMINLSQSICLSSGLDNGQCLRYLMMATRDESIKHISKYEEVMNFDFKSLEGLNLQENEIYIGEFDYYFYSQNGYPATISDSKIYYKLNGNVGDKGNNYYNTFLIQSPVYSFVVKSQGEYKLVPLVDFLSVSKKYPNYRPNPLYERLYSIFDRVLNGENVKVIHKIKSNITCTGQSGNVSIYKLEGVGSNTSFESLGTKRVYLKVSGDSSEGTVDYKVVLPKLYIVRTSESTIGLVSPQQLYAYSDCNSMLYGSEPYVLREQNYVRMKKTSLLENIFFVKNNKVYVNLEDKTYELSMTPVKFPKEDWGISIYHNGLQDSVYFSNIKYHNVGFFSGWQTIYNPKMNFKESGGQIDFLSIYDSSNKSTYGVGYISGFIFTYEDNTEYKLSVVPKLVSNGVSLISYLKKENPYKNIQEYYKIKTVYTLPFTQTFNFNMKENLYQNAIGFNLSNKMNVFKHFKPYFPRLDEWLNGNNNCIGVQGNKQVMLDSTIKDLANYFRPLNFRAMDLHINYLDLNKFMSLFQVISEQTYNTETRDYI
Physico‐chemical
properties
protein length:932 AA
molecular weight: 106837,17410 Da
isoelectric point:5,75645
aromaticity:0,11803
hydropathy:-0,54378

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010082887.1
1 932
Domain Start End Length (AA) Confidence
N-terminal 1 491 491 0,9153
Central domain 492 704 214 0,4305
C-terminal 705 932 227 0,3618
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-491
Central
492-704
C-terminal
705-932

Taxonomy

  Name Taxonomy ID Lineage
Phage Fusobacterium phage Fnu1
[NCBI] 		2530024 Uroviricota > Caudoviricetes > Latrobevirus >
Host Fusobacterium nucleatum ATCC 10953
[NCBI] 		76857 Fusobacteriota > Fusobacteriia > Fusobacteriales > Fusobacteriaceae > Fusobacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010082887.1 [NCBI]
Genbank nucleotide accession
NC_055035 [NCBI]
CDS location
range 65598 -> 68396
strand -
CDS
ATGCAAAAACCTAATTTATTAGAGGATAAACCTACTATAAATGCAGATGAGAATATATGGGGTATTAAATTAAATAAGATAATAGATAAACTTCAAGTATTTGTAAATAGTATAGTAGAATCTGTAAGTGGAAAACTGGATAAAGGAAATGTATCCTCTAATTTTGATACAGCAGAAAAAATAGAAAATGAGATAAAAAATAAGGTTAGTCAAGAAGATTTTGACAGAAATATATCGGACATAGGAGATAAACAAAGAGAAACAGATAATTTTATTCAAGATTTTCAAAATAAAAGTTATGTTTATCATCAAAGTAAAGAATTATATGATAATCAAGGTAAAATTACAGATTTAATAATAAGTAACCTTACAGTTGAATCTCTTAATGGTAATAGTGTAGGAGGTAGTCTATCTGAAGAACAAATAAAAACTATATGTAGTAAATATTATGAACCTAAATTTAATAAAAAAAGTGGTTGGAATTTAGATATTAGTTCAGACGAAAACTCTAATTCAGATAGTGTTATTGCTAGTACAAAGTTAGTATATAATATTAAAGAAAATAGTATAAATAAAGACTATTTAACTAAATTACCTCAACAATTAAGTATAGATGGTAATATTCTTAAATACAAAGTTGAACAAGGTGGAAGATTTATTGATAAAGAATTAAATTTACCTAGTAGTGTTACAGAAAATTGGGCAAATGAACGATTTGAGCCTATAATAGAGGAAAAAAAAACTGGGTTTAACAAAGATAAATCAGATGATTATAATTTAGGGGATAGCAATATATTAGCTACTACTAAAGCCACTAAAAACCTTTCAGAAAGCTTAGATAAAGTTGTTAAAGATATAAGTATAAGTGAAGGAAAATTAAAGTATAAAGAGGGTCTTGTAGGTTTAAGTAAAGAATTAGAATTACCTAGTGGAAGTGGAGGAGGAAGTGTACCTATAAATACTATGTTATATACTTCTCAACAAAAAATGGAAACATCTACAGGATTACCTATTAAAAATATTAATATAGAGAGTATAAATGATAAGAAAATAGAGGATTTAACTAAAGTAGAGGGATTATATACACATAAAGAATTAGTAGATTTATCAGAATCTAACTATGAAAAATTTAAAGATGAAATTCCATATTTTGATACTTTTGATTTAAAAATAGTTACTAGAAGTAAAATGATTAATCTTTCTCAAAGCATATGTTTGTCATCAGGCTTAGATAATGGACAATGTTTAAGATATTTAATGATGGCAACTAGGGATGAAAGTATTAAACATATTAGTAAATATGAAGAAGTAATGAATTTTGATTTTAAAAGCTTAGAGGGATTAAATCTGCAAGAAAATGAAATATACATAGGGGAATTTGATTATTATTTTTATTCCCAAAATGGGTATCCAGCTACTATATCAGATAGTAAAATATATTATAAATTAAATGGAAATGTAGGAGATAAAGGAAATAATTATTATAATACTTTTTTAATACAATCTCCAGTATATTCATTTGTAGTTAAAAGTCAAGGAGAATATAAACTTGTACCTTTGGTAGATTTTCTTTCAGTGAGTAAAAAATACCCTAATTATAGACCTAATCCTCTGTATGAAAGATTATATAGTATATTTGATAGGGTTTTAAATGGAGAAAATGTAAAAGTTATTCACAAAATTAAGAGTAATATAACTTGTACAGGACAAAGTGGTAATGTTTCAATATATAAATTAGAGGGGGTAGGTTCTAATACTTCTTTTGAATCTTTAGGAACTAAAAGAGTATATCTTAAAGTTTCAGGGGATTCAAGTGAAGGTACTGTAGATTATAAAGTAGTATTACCTAAGTTATATATTGTTAGAACATCAGAAAGTACAATAGGGTTAGTATCCCCACAACAATTATATGCTTATTCGGATTGTAATTCTATGTTATATGGTTCAGAACCTTATGTATTAAGAGAACAAAATTATGTAAGAATGAAAAAAACTTCACTATTAGAGAATATATTTTTTGTTAAGAATAATAAAGTATATGTTAATTTAGAGGACAAAACTTATGAACTTAGTATGACTCCTGTAAAATTCCCAAAGGAAGATTGGGGTATTAGTATATATCATAATGGTTTACAAGATTCTGTTTATTTCTCAAATATAAAATATCATAATGTAGGGTTCTTTTCAGGTTGGCAAACTATTTATAACCCTAAGATGAATTTTAAAGAAAGTGGAGGACAAATAGATTTCCTTTCTATATATGATAGTTCTAATAAGAGTACATATGGTGTAGGTTATATTTCAGGTTTTATTTTCACATATGAGGATAATACAGAGTATAAACTTTCAGTAGTACCTAAGTTAGTAAGTAATGGAGTAAGTTTAATTTCCTATTTGAAAAAAGAAAATCCTTATAAAAATATACAAGAATATTATAAGATAAAAACAGTATATACATTACCATTTACTCAAACTTTTAATTTTAATATGAAAGAAAATTTATATCAAAATGCAATAGGTTTTAATTTAAGTAATAAAATGAATGTGTTTAAACATTTTAAACCTTATTTTCCTAGATTAGATGAATGGTTAAATGGAAATAATAATTGTATAGGTGTTCAAGGAAATAAACAAGTAATGTTAGATAGTACAATTAAAGATTTAGCAAATTACTTTAGACCTTTAAATTTTAGAGCTATGGATTTACATATAAATTACCTAGACTTAAATAAATTTATGTCTTTATTTCAAGTTATATCAGAACAGACTTATAATACAGAAACAAGAGATTATATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f733a8d7bdb1fab4a93cbf239648a60da2d67938fc99eb3c22ed2c40a7f9ed51
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3404
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic, morphological and functional characterisation of novel bacteriophage Fnu1 capable of disrupt Fusobacterium nucleatum biofilm Kabwe,M., Brown,T.L., Dashper,S., Speirs,L., Ku,H., Petrovski,S., Chan,H.T., Lock,P. and Tucci,J. 2019-06-24 — GenBank