Protein

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Genbank accession
APD19732.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,55
Protein sequence
MAKGWSFSALINALRGAAFLDVGTSAGTVAAGDDSRVVNAVQQTGDTMSGSLAVRVNQAAIALRPVADGQTNYLVGKNAANNLDVWFVGLRDSDSVKFGRQGYGELYFKEDGTSGWVNTVSGQSLSFNNGGDIFYRSAPNGVHYFNSDVEIQSSGISLKIAPDADNEPSYIAGSNAAKTGTTWRVGKIGVGADVVVANLVSGQAIGLSSNGNMYYDVANSNFQHVFGQTVTAPNILAGGLTITKNGGDAIVVKPATSGGAGIQFRNASNIAVASVGVMADGTAELVNSQSGTSIRISSGGVVSINSPSTTIFTAHTASGDVGAFRDVWAGNGTVKLTANGNLEANVGAVSVWGVGGNLKSYIDNGLATKLGVNSNAVSATKLQTARKINGVLFDGTQDINLDLGVRLVAYGAYANFANTPTNITAVTSNTVTFTFAWGGTNNFVKLGTTKVVFLESTATELVPNQTVYKRFGKLGEFVITGRTPSGSNQEVSTFTVDYPNHGIAIGQSRTIRLSAFIYEQVGLSCEGNIVDNGSLWASLRLELATEVSTQTVPTSATTPMTQENAIAYFGSDTLYGSNSINTHSNGVATSANILADRKTINLCTINNSSDTRALTSLTTVKIYDYV
Physico‐chemical
properties
protein length:626 AA
molecular weight: 65081,51860 Da
isoelectric point:5,81869
aromaticity:0,07987
hydropathy:0,00192

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PP101
[NCBI] 		1916414 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD19732.1 [NCBI]
Genbank nucleotide accession
KY087898.2 [NCBI]
CDS location
range 50257 -> 52137
strand +
CDS
ATGGCCAAAGGTTGGTCTTTTAGTGCATTAATAAATGCCCTCAGAGGTGCCGCATTCTTGGATGTTGGGACTTCTGCTGGCACTGTTGCTGCGGGAGATGATTCCCGTGTTGTGAATGCGGTACAGCAAACTGGCGACACCATGAGTGGCTCCCTTGCTGTTCGTGTAAACCAAGCTGCGATTGCACTCCGTCCTGTTGCGGATGGACAAACGAATTACCTTGTCGGCAAGAATGCTGCAAACAATTTGGATGTTTGGTTTGTTGGACTTCGTGATTCCGACTCTGTTAAATTTGGACGTCAGGGATATGGTGAACTATATTTCAAGGAGGATGGAACATCTGGTTGGGTCAATACTGTTTCTGGACAGTCTCTGTCATTCAATAATGGTGGCGACATCTTCTATCGGTCTGCACCCAACGGTGTTCACTACTTCAACTCAGATGTTGAAATCCAAAGTAGTGGAATCTCCCTGAAAATTGCACCTGATGCAGATAATGAACCGAGCTACATTGCAGGTTCCAATGCAGCCAAAACAGGTACAACTTGGCGAGTCGGTAAGATTGGCGTTGGTGCTGATGTTGTTGTTGCGAACTTGGTTTCTGGACAGGCAATAGGATTGTCCTCGAATGGCAACATGTACTACGATGTTGCGAACAGCAACTTCCAACATGTGTTTGGGCAGACGGTAACTGCACCAAACATTTTAGCTGGTGGGCTCACCATAACTAAAAATGGTGGTGATGCTATTGTAGTTAAGCCTGCCACATCAGGTGGTGCTGGGATTCAATTTAGGAACGCTTCTAATATTGCTGTAGCTTCTGTGGGTGTTATGGCTGACGGAACTGCGGAATTAGTAAACAGTCAATCAGGCACAAGCATTCGAATTAGCTCAGGTGGGGTTGTCTCTATTAACAGCCCCTCAACAACAATTTTCACTGCACATACTGCATCAGGAGATGTTGGAGCATTTCGGGATGTCTGGGCCGGAAATGGTACTGTAAAACTGACAGCAAACGGAAACTTGGAAGCCAACGTTGGTGCTGTGAGTGTGTGGGGTGTGGGTGGAAACCTAAAAAGTTACATCGACAATGGTCTTGCAACAAAACTCGGCGTGAACTCTAATGCCGTAAGTGCAACCAAATTACAGACTGCACGTAAAATCAATGGTGTGTTGTTTGACGGCACGCAGGATATTAATCTTGACCTTGGAGTGAGGTTAGTCGCCTACGGTGCGTATGCAAACTTTGCCAACACACCAACAAACATAACAGCCGTAACATCTAACACAGTGACCTTCACTTTTGCTTGGGGTGGGACAAACAACTTCGTGAAGTTGGGAACTACGAAGGTTGTGTTTTTGGAGTCAACTGCAACTGAGCTGGTTCCAAACCAAACGGTTTATAAGAGGTTTGGCAAGCTTGGTGAGTTTGTTATAACCGGCAGGACACCAAGCGGCTCCAATCAGGAAGTGTCTACATTCACAGTAGACTACCCAAACCATGGGATTGCGATTGGACAGTCAAGGACAATACGCCTTTCTGCATTCATATACGAGCAAGTGGGTTTGTCCTGTGAAGGAAACATCGTAGATAATGGCAGCTTGTGGGCCTCACTTAGGTTGGAGTTGGCAACAGAAGTATCAACTCAAACTGTTCCAACCTCTGCGACCACACCAATGACTCAAGAAAATGCCATTGCGTACTTCGGAAGCGATACTTTATATGGAAGCAACTCCATCAATACACATAGCAATGGAGTTGCCACGTCGGCCAACATCCTTGCAGACAGGAAGACAATAAACCTGTGCACTATTAACAACAGTTCGGACACACGCGCGCTTACAAGCTTGACGACAGTGAAGATATACGATTATGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d153ca883462e82d30eb74d01a436cdc189ddc403b339cbdbc918a209c9a6708
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5936
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50