Protein

View in Explore
Genbank accession
QMV32423.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,55
TF
Evidence RBPdetect
Probability 0,55
Protein sequence
MKRLIFAFFFCISAHTNAQFVSGQVLTASGLNAALSQKIQASDLSNSSDPTKGAALIGYGSGTVASALNANALQFVTAAGAANIKPNTAYSYILPTASAATITGGGDGTNMQLVGYTHNRQEFAGPGSSFTYNYPPSNSDPSTLRLFKAGTDGAGTLTTLVWTTSGSPTGTQWNGTIGGGTVSITTGTALLTGETLIVEDPNAVTATTGQAPSYSSIHGAYDGSIQSGLMQHIIASAHSRIYDRDGVGGHNGIILGSFHRITGPGAYNGILFGTGSEVSGSATNGSMVLGGIYSKNTGTTSVALACERCKVSSTYAIAQGQSQNVSGTASGALGRGNTVSAANALATGQNGLISGDNSTGHGNSYSLTHSYTFNAAGYKTRSIAAGDVILWGYRDTSAGYAGGSAGLNPVIQDHRLYWNGYWTDTSSHLITNAIDETTTDIPITAGAVTLYRIRVTARGGSLRGGAWIMTCAVQAPSSLSSGTPATLIGGACTSDFSQVDSGLGTSSNAAGVSVAINSSTGAGLQVTAKQRADTAVATKWAAVIEVLEVN
Physico‐chemical
properties
protein length:550 AA
molecular weight: 55669,82230 Da
isoelectric point:6,82150
aromaticity:0,07273
hydropathy:0,00145

Domains

Domains [InterPro]
DC_0261
STR
1–281
DC_0261 DC_0296
IPR011049
STR
245–375
IPR011049
QMV32423.1
1 550
Architecture
STR
RBD
STR 1-375 | RBD 404-550
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMV32423.1
1 550
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,1746
Central domain 186 386 202 0,8014
C-terminal 387 550 163 0,9534
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-386
C-terminal
387-550

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage Albius
[NCBI] 		2759712 Uroviricota > Caudoviricetes > Rahariannevirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMV32423.1 [NCBI]
Genbank nucleotide accession
MT740726 [NCBI]
CDS location
range 29529 -> 31181
strand +
CDS
ATGAAACGACTCATTTTCGCATTTTTCTTCTGCATTTCAGCGCACACTAATGCGCAGTTCGTCTCAGGTCAGGTTCTTACCGCTTCAGGCCTGAATGCCGCTCTGTCGCAGAAGATTCAGGCCTCCGACCTGAGTAATAGCAGTGACCCAACGAAGGGCGCTGCGCTTATTGGGTACGGCAGCGGGACCGTTGCGAGCGCGCTCAATGCCAATGCATTGCAGTTCGTGACAGCGGCCGGGGCCGCCAACATCAAACCGAACACAGCCTACAGCTACATTCTGCCTACCGCCAGCGCAGCCACAATTACCGGTGGCGGCGATGGCACCAACATGCAGTTGGTAGGTTACACGCACAATCGACAGGAATTTGCTGGGCCCGGTTCGTCGTTCACGTACAACTACCCTCCCTCGAACAGCGATCCATCGACCCTGAGGCTGTTCAAGGCGGGTACCGACGGCGCTGGCACGCTGACAACACTCGTGTGGACGACATCCGGCAGCCCTACCGGCACGCAGTGGAATGGGACCATTGGTGGAGGGACCGTCAGCATCACGACCGGCACTGCGTTGCTGACAGGCGAAACACTGATCGTTGAGGACCCGAATGCCGTGACTGCGACCACGGGGCAGGCGCCCTCGTATTCGTCGATTCACGGCGCCTACGACGGCTCGATTCAGTCTGGGTTGATGCAGCACATCATCGCCAGCGCGCACTCGCGCATCTACGACCGTGATGGGGTGGGCGGACACAACGGCATCATTCTGGGGTCGTTCCACCGGATTACCGGACCTGGCGCGTACAACGGCATCCTGTTCGGAACTGGTAGCGAGGTATCTGGCAGCGCCACCAACGGCAGCATGGTGCTCGGCGGCATCTACAGCAAGAATACCGGAACCACGTCTGTTGCACTGGCGTGCGAGCGCTGCAAGGTCAGTTCCACCTACGCGATTGCGCAAGGGCAGTCCCAGAACGTCAGCGGCACGGCATCTGGTGCGCTGGGGCGCGGCAATACGGTCTCCGCTGCCAATGCTCTGGCAACCGGACAAAACGGCCTCATATCCGGTGACAATAGCACCGGTCACGGCAATTCCTATTCGCTCACCCATTCGTACACGTTCAACGCGGCAGGCTACAAAACAAGGTCCATAGCCGCCGGCGACGTGATCCTGTGGGGCTATCGTGACACCTCAGCAGGATATGCGGGTGGATCTGCTGGATTGAATCCAGTGATCCAGGATCACCGTCTCTACTGGAACGGATACTGGACAGATACGTCGTCCCACCTGATCACAAACGCCATTGACGAGACCACGACCGACATCCCGATCACGGCTGGCGCGGTCACGTTGTATCGCATTCGGGTGACTGCGCGAGGCGGTAGCCTACGCGGTGGGGCCTGGATCATGACCTGTGCTGTGCAGGCACCGTCCTCCCTGAGCTCAGGGACTCCAGCAACCCTTATCGGCGGGGCATGCACCTCCGATTTTTCACAGGTCGACTCTGGCCTTGGAACCAGTTCCAACGCAGCTGGAGTTTCAGTTGCGATCAACAGTTCCACTGGGGCTGGCCTACAGGTCACCGCAAAACAGCGTGCCGATACTGCCGTCGCCACCAAATGGGCGGCTGTCATCGAGGTCCTGGAAGTGAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f683bc5e8d3f8050810db1c8919afbfdc4da3faa2aff5a2862f555b13721c6f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6348
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ralstonia phages Trotereau,A., Boyer,C. and Torres-Barcelo,C. 2021-03-08 — GenBank