Protein

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Genbank accession
YP_010670096.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAFTKIAAAGIGSTGTVTLERLIVTGSIDTPVITGAASTANVRANSLVVSGVSTFGSVVATTGTFSGNVSIAGTLTYEDVTNIDSVGLITARSGVVVNTGTATTALVVNGSARITGILTIGTSSVTLDGTNNQVNVGTGVTIHHTNGVQVGGNTVHSTGLTVNQVNAIGIITASSFRGDGSQLTGIAATTNVRTNSLVVSGVSTFAAGSVSAPSISPTGDSNTGLFFPDADTIAIAEGGVEALRIDSSSNIGIGTNAPTTKLTITDGVAPYAATTGDLIQLKRGVSNGNDTTSATGISFANNSNGFRIAYGGTNDRLRFIDGGAIECLSLLNGGNTGIGTVSPRVKLDVGNGKLLVVQSGTPTGNYNYGVNTHVASGAGGMQVTSGSSYSYFVGNSTDIILGSDQGSTGIKVQVSRTCGDNSLVITSSGQVVANYNSTTGVVNSFGHGGYYGLSANSNSTALADQRCSWFLRGSLEGTNNELGNSVLLIQNTGGAAINIGDLIKGYRGSSLIFRVSGGDGSVRNSSGSYAAISDERIKQDIVDAESQWNDIKSVRVRKFKLKENVETYGESAPTFIGVIAQELEQISPGLVDQAKLKNGSSDPESIKSVKYSILYMKSVKALQEAQQRIETLESQVSLLIRKVEELENKII
Physico‐chemical
properties
protein length:651 AA
molecular weight: 66599,24710 Da
isoelectric point:5,69148
aromaticity:0,05069
hydropathy:0,03379

Domains

Domains [InterPro]
DC_1671
RBD
4–651
DC_1671
IPR036388
RBD
525–650
IPR036388
IPR030392
CHP
533–591
IPR030392 Coil
IPR030392
CHP
533–636
IPR030392
YP_010670096.1
1 651
Architecture
RBD
RBD 4-651
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010670096.1
1 651
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,9657
Central domain 17 215 200 0,5243
C-terminal 216 651 435 0,9176
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-215
C-terminal
216-651

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SRM01
[NCBI] 		2781608 Uroviricota > Caudoviricetes > Pantevenvirales > Serangoonvirus > Serangoonvirus essarone
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010670096.1 [NCBI]
Genbank nucleotide accession
NC_070963.1 [NCBI]
CDS location
range 65425 -> 67380
strand +
CDS
ATGGCATTCACGAAGATTGCTGCCGCTGGTATTGGAAGCACAGGAACAGTTACATTAGAACGACTTATTGTAACTGGAAGCATTGATACTCCTGTGATTACTGGAGCAGCATCTACGGCAAATGTAAGAGCAAATAGTTTAGTTGTATCTGGAGTTTCGACTTTTGGTAGTGTTGTAGCAACCACAGGAACTTTTAGTGGTAATGTCAGTATTGCTGGAACTCTGACTTATGAAGATGTCACTAATATTGATTCGGTTGGTCTGATTACTGCTAGAAGTGGTGTAGTAGTAAATACAGGAACAGCAACAACAGCATTAGTTGTTAATGGTAGTGCAAGAATTACTGGTATTTTGACAATTGGAACCAGTTCTGTAACTCTTGATGGAACGAATAATCAAGTTAATGTAGGAACTGGTGTTACGATTCATCACACTAATGGTGTTCAAGTTGGTGGAAATACAGTTCATTCAACTGGACTTACTGTTAATCAAGTGAATGCAATTGGTATTATTACAGCATCAAGTTTTAGAGGTGATGGTTCTCAACTGACTGGTATTGCTGCTACGACGAATGTAAGAACTAATAGTCTTGTTGTTTCTGGGGTTTCTACTTTTGCTGCAGGTAGTGTTAGTGCTCCTTCTATAAGTCCAACAGGGGACAGTAACACAGGACTATTTTTTCCTGATGCTGATACTATAGCAATTGCTGAAGGTGGTGTTGAGGCATTAAGGATTGATAGTAGTTCTAATATTGGTATAGGAACCAATGCCCCAACTACAAAACTCACAATAACAGATGGTGTTGCTCCTTATGCGGCAACCACTGGCGATTTAATTCAACTTAAAAGAGGTGTATCAAATGGTAATGATACAACTTCTGCTACTGGAATTTCATTTGCCAACAATAGTAATGGATTCCGTATTGCTTATGGTGGAACAAATGATAGATTGAGGTTTATAGATGGCGGTGCTATTGAATGTCTTTCTCTATTGAATGGTGGAAATACTGGAATAGGAACAGTAAGTCCAAGAGTAAAACTTGATGTAGGCAATGGAAAACTTTTAGTAGTACAAAGTGGGACTCCTACAGGAAATTATAATTATGGAGTAAATACACACGTTGCTTCAGGTGCTGGAGGAATGCAGGTTACTAGTGGAAGCAGTTATAGTTATTTTGTTGGCAATTCTACTGATATAATATTAGGTTCAGATCAAGGATCTACTGGAATTAAAGTTCAAGTTTCAAGAACTTGTGGAGACAATTCTTTAGTTATAACTTCTTCTGGACAGGTTGTTGCAAATTATAACTCAACAACTGGAGTAGTTAATTCTTTTGGACATGGTGGTTATTATGGATTAAGTGCAAATAGTAACTCTACAGCATTAGCAGATCAAAGGTGCTCTTGGTTTTTGCGTGGTTCTTTAGAAGGTACTAATAATGAATTAGGAAACTCTGTATTATTAATTCAAAATACAGGAGGAGCTGCAATTAATATTGGAGATCTAATAAAAGGATATAGAGGTTCTTCACTCATATTCCGTGTATCTGGTGGTGATGGAAGTGTTAGGAACAGCAGTGGAAGTTATGCTGCTATTTCTGATGAAAGAATTAAACAAGATATTGTTGATGCAGAATCGCAATGGAATGATATTAAATCAGTTCGTGTTAGAAAATTTAAACTTAAAGAAAATGTTGAAACTTATGGCGAATCTGCACCAACATTTATTGGTGTTATAGCCCAAGAATTAGAACAAATAAGTCCTGGACTGGTTGATCAAGCAAAATTAAAAAATGGTTCTTCGGATCCAGAAAGCATTAAATCTGTAAAATATAGTATTTTATACATGAAATCAGTTAAAGCTCTTCAGGAAGCACAACAACGTATTGAAACTTTAGAATCACAAGTTTCTTTACTTATAAGAAAAGTTGAAGAATTAGAAAATAAAATTATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
162a146e6de420dd7a7e3efb2a7983f88e17645e49d618ed0d02313896001f48
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6333
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50