Protein

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Genbank accession
XOD41620.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,51
Protein sequence
MRQISISLADNPIGASPLVGLYKAINAKYSSLGLTQANSRVIRVQPAATKERPNQTVVFIQKGTSYDTIYDFYYDRFNLNDFIENPYWTASEVEELQQMENSTEVLGEVARKSTLNLTKSDIWVNDTSIDYTGGQVGPNWLLKSIYNSLYFTGELVLWLHSGGDGPGPEPEPTDGFYEHIFEGSISNYITGTFGNPGYYVSLSVQQNGNRVYVLEPIPEGEKVPTLNWPTYHENDPATLVPGHEWIIINNSGHEITFDPEGLSHNKFLLPAWNVIAVKQGGTIRGTAIGWDNNTNQWIWAISGDIVQGKTVGSSIMDDLISWYAMEGIATDSHGGHNFGFNSESTIPGKVGQALSGIKASGAEGNFGSYNSGTAMFGWFKVNNPTVSQEYVLTLGKFGEYYGCKYGLSYRGSNGWRGFSRNAANTETTVSTGGQHMGKGEWQFIVLQVKDRFLEIYVDNGNPIRKEIPLPSSGSYDGLQFGEIFSDSKFDGAVDEVGLCWRPLEKEEIAWLYNNGQGRTYETLV
Physico‐chemical
properties
protein length:524 AA
molecular weight: 57995,67330 Da
isoelectric point:4,83077
aromaticity:0,12405
hydropathy:-0,38378

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
317–515
G3DSA:2.60.120.200
IPR013320
STR
370–516
IPR013320
PF13385
LEC
378–509
PF13385
XOD41620.1
1 524
Architecture
STR
STR 317-516 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD41620.1
1 524
Domain Start End Length (AA) Confidence
N-terminal 1 341 341 0,4126
Central domain 342 513 173 0,3265
C-terminal 514 524 10 0,0949
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-341
Central
342-513
C-terminal
514-524

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HHBS36_1
[NCBI] 		3390392 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD41620.1 [NCBI]
Genbank nucleotide accession
PQ287642 [NCBI]
CDS location
range 143049 -> 144623
strand -
CDS
ATGCGTCAAATTTCTATTTCACTTGCCGATAACCCTATCGGTGCTAGTCCATTAGTTGGACTTTATAAAGCGATTAACGCTAAATATTCCAGCCTAGGTCTGACCCAAGCAAACTCTCGGGTTATTAGAGTACAACCAGCAGCAACTAAAGAAAGACCCAACCAGACAGTAGTGTTTATTCAGAAGGGAACTTCTTATGACACTATTTACGATTTTTATTACGATCGTTTTAACCTAAACGATTTTATTGAAAATCCATACTGGACGGCTTCTGAAGTTGAAGAACTCCAACAGATGGAGAACTCTACTGAAGTCCTTGGTGAAGTGGCTCGTAAATCGACTTTAAATTTAACAAAATCAGATATTTGGGTTAACGATACTTCTATCGATTATACCGGTGGACAAGTCGGACCTAACTGGTTATTAAAGTCTATTTACAACTCACTGTATTTTACCGGCGAACTAGTTCTTTGGTTACATTCAGGTGGAGATGGTCCTGGTCCAGAGCCTGAACCTACAGATGGGTTCTATGAACATATCTTCGAAGGTTCGATCTCTAATTACATTACTGGTACATTTGGTAACCCAGGTTACTATGTATCTCTTAGTGTACAACAGAATGGTAACCGTGTTTATGTACTCGAACCAATTCCTGAGGGTGAGAAGGTACCTACACTGAACTGGCCTACCTACCATGAAAATGATCCAGCTACACTTGTACCTGGACATGAATGGATTATTATCAATAACTCCGGACATGAGATCACATTTGATCCAGAGGGACTTAGTCATAATAAATTCCTCTTGCCTGCGTGGAATGTAATCGCAGTTAAACAGGGTGGGACTATTCGTGGTACTGCCATCGGTTGGGATAATAATACCAATCAATGGATTTGGGCAATTTCTGGGGATATTGTTCAAGGTAAAACTGTAGGTAGTTCTATCATGGATGACTTGATTAGTTGGTATGCCATGGAAGGGATTGCTACAGACTCACACGGCGGTCATAACTTCGGATTTAACTCTGAAAGTACGATACCTGGTAAAGTTGGTCAAGCACTAAGTGGTATAAAAGCTTCCGGTGCTGAAGGTAACTTCGGTAGCTATAATAGCGGTACGGCAATGTTTGGTTGGTTTAAAGTAAATAACCCAACCGTAAGTCAGGAATATGTATTGACTCTTGGTAAGTTTGGCGAGTACTATGGCTGTAAGTACGGCTTATCGTACAGAGGTTCCAACGGCTGGAGAGGATTCTCTCGCAATGCTGCTAACACAGAGACTACTGTATCTACTGGCGGTCAACACATGGGTAAAGGAGAATGGCAATTCATCGTTCTTCAAGTAAAAGATCGATTCCTTGAGATCTATGTTGACAATGGTAATCCGATACGTAAAGAAATTCCATTACCAAGTAGTGGTTCTTATGATGGTCTACAGTTCGGAGAAATCTTTAGTGATTCCAAGTTTGATGGTGCTGTAGATGAAGTTGGATTATGTTGGCGACCGCTAGAGAAAGAAGAGATCGCGTGGCTATACAACAATGGTCAAGGTCGTACTTATGAAACTCTTGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d58e7e7795a8b0f286d5142d66860cbec318f795ad21b13763dc87d1618fc75c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6412
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50