Protein

View in Explore
Genbank accession
AVZ45681.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MINVSGFGASIRLVASNTFPNGVTLSDFADDADPIDAPDLQISEAAMGLNGDLVVWNRANPLEVGVNIIPTSESDVNLDVLAAANRVGKRKNSAKDVITLILTYPSGMVITLNKGTLTTGSVIPGIQSQGRVKTRQYRFKFENVVKTGVSNQEIL
Physico‐chemical
properties
protein length:155 AA
molecular weight: 16516,60400 Da
isoelectric point:5,36329
aromaticity:0,05161
hydropathy:0,02968

Domains

Domains [InterPro]
IPR054440
STR
2–144
IPR054440
AVZ45681.1
1 155
Architecture
STR
STR 2-144 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM-Ro157lw
[NCBI] 		2144177 Uroviricota > Caudoviricetes > Lindbergviridae > Wifcevirus Ro157lw >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVZ45681.1 [NCBI]
Genbank nucleotide accession
MH051335.1 [NCBI]
CDS location
range 23541 -> 24008
strand +
CDS
ATGATTAACGTTTCCGGTTTTGGCGCTTCGATTCGTTTAGTGGCATCAAACACTTTTCCAAATGGTGTAACTCTTTCTGATTTCGCAGATGATGCTGATCCGATTGACGCGCCTGATCTTCAAATCTCTGAAGCCGCAATGGGGTTGAACGGTGACCTGGTAGTCTGGAACCGTGCCAACCCTCTTGAAGTAGGCGTCAACATCATCCCTACTTCTGAAAGCGATGTAAACTTAGATGTTCTGGCAGCGGCTAACCGTGTAGGCAAGCGCAAGAACTCTGCGAAAGACGTGATCACCCTTATTCTGACCTACCCTTCTGGCATGGTCATCACACTGAACAAGGGAACTTTGACGACTGGTTCAGTGATTCCTGGCATCCAGTCTCAGGGTCGTGTAAAAACACGTCAATATCGCTTTAAGTTTGAGAACGTAGTCAAAACTGGCGTGAGCAACCAAGAGATTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7a725817176a829ecc14afdea1101db41731625efe01484d26c6f292abe3359
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7485
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomics characterization of novel bacteriophages specific to non-O157 and O157 Shiga toxin-producing Escherichia coli (STEC) in non-fecal composts Liao,Y.-T., Sun,X., Quintela,I.A., Bridges,D.F., Liu,F., Zhang,Y., Salvador,A. and Wu,V.C.H. 2019-04-02 — GenBank