Protein

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Genbank accession
WBK39979.1 [GenBank]
Protein name
fibronectin-like protein
RBP type
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MIYTVAIGDTLVNGLTNLSRVETLDESLDYASIILNKELSLTTKQMKEVVTITVNDNSEIRSYYFLIDSDISTPIDKDDLTFSRHEISLIELTSRLSDYTVGYRQFTNQDDDLYDVLSDLTQTVFFRNSFIGDSTRRIDVDLTHSSLDRLKDVQSRDFQFDNHTYFEACVAIMNEVGGFPRVIYENGIYKLTLDLKNERNTLRNLLASSENNYKQTHNITKYGTTMESYTDNQVFDNTLAGASTVEPSANGFMPVRTVSEVFNSDSSVIITRYDIRQIVKAELFFDNVDATTLTFDLTPRVVNESVYNGLEVGDVTLVDLGNTTDGNLPKQVAPAPTLIDGRLQVQQKIGTLFYKDNIIQNFFTFFGNTVWTEPNWDYIVNSVYFEEYGNGVGTSAKLKFNSDMYDFENIRMRITYIPIFDGVLHAEKYSVDDVDKFTMIQSNQSASAISTEKALKSLGAEINALGNKEIMTTSRITLLADEFNIGDFTSDGFILTNKEVIYNKDEMIVRYEWDKDYQKRNEDIAVDSAIRFYAIPQGGVSNRKLYYKEYVYVGFDGLTSESTLLNTRGREIFTNVFGKEAQYNTSIQNGFITNEEVLTTTNPILLPVISTGGRNALNFNFGFQSPIVAGERLDLTSQTIPLLEPINYTADDGELEFINFELVDTVDVTDPTTLPLTPYTDRDNTLVGSIFNQYLVKKDSAEIIDISYQVHMIPNTNIVIGDYLSTRNNLIENKTAFDDLVVYSSDTYYSPQETAKVKGSIATGVTVSKLSNEIIKISSNVNNTAWAIATTNGELVIAVNQFDALQDEINFKYFNSRNDIDYSFIGDVIFELPDSPSDLTVTTINAGTLDLEWVDNSTDETNFLIYISDNGTNYNLLDTVGANVTTYTSDGLMAGTTYYYRVFASNQAGVSVNFASNFGTTDAEPNPPLPVTNYIVTAQDSDKLNATWTGSAGATNYVLEIKKNVDTIWTVVEILAAFENYQWSGLDASTLYDTRIKAKNSEGSSGYKNYSVFTGSGVSQTARPTILNVVAGETTVDFDVRNNDGSTATVYVDYNDSTPDRQSDTVSSGGTQSFQFTGLQADTSYTLYAKAQASGETLSSADSEGFTTDPLSTPPSAPTTFTGSFASGGIQMNWNNVANETGYTIELHYNSSFTNLAVSIDKAANTTSHLESPLITGTYWARIRAYNGVGNSAWKENTDNGIVVS
Physico‐chemical
properties
protein length:1205 AA
molecular weight: 133895,28750 Da
isoelectric point:4,33968
aromaticity:0,10871
hydropathy:-0,28315

Domains

Domains [InterPro]
IPR013783
STR
830–919
IPR013783 IPR013783 IPR003961 IPR003961
IPR036116
STR
832–1014
IPR036116 IPR036116
IPR003961
STR
833–911
IPR003961 IPR003961 DC_0960
IPR003961
STR
834–911
IPR003961 IPR003961 IPR013783
IPR050713
Unmapped
872–1192
IPR050713
WBK39979.1
1 1205
Architecture
STR
STR
STR 830-1014 | STR 1018-1204 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage PinkBerry-associated phage LS06-2018-MD08
[NCBI] 		3003836 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBK39979.1 [NCBI]
Genbank nucleotide accession
OP947164 [NCBI]
CDS location
range 22343 -> 25960
strand +
CDS
ATGATATATACAGTAGCAATAGGCGATACATTAGTAAATGGATTAACAAATTTATCAAGAGTTGAAACGCTAGATGAGTCATTAGATTACGCCTCTATTATCTTAAACAAAGAGTTATCACTAACAACTAAACAAATGAAAGAAGTTGTTACTATCACAGTCAATGATAATAGTGAGATTCGAAGTTACTATTTCTTGATAGATAGCGACATATCAACACCAATAGATAAAGATGATTTAACATTTTCAAGACACGAGATTAGTTTAATAGAATTAACATCACGTTTAAGCGATTATACGGTAGGCTATAGACAGTTTACTAACCAAGATGATGATTTATATGATGTGTTGAGTGATTTAACGCAGACAGTGTTTTTTAGAAATTCATTTATAGGCGATTCAACTAGAAGAATTGATGTAGATTTAACACATTCAAGTCTTGATAGACTAAAAGATGTACAATCGAGAGATTTCCAATTCGATAATCATACATATTTCGAGGCTTGTGTAGCCATTATGAATGAAGTTGGTGGTTTTCCACGAGTGATTTATGAAAATGGTATCTATAAATTAACTCTTGACCTTAAAAATGAACGTAATACATTAAGAAATTTACTAGCAAGTAGCGAAAACAACTATAAACAAACACATAATATCACTAAATATGGTACTACAATGGAGAGTTACACCGACAATCAAGTGTTTGATAACACATTAGCAGGTGCTTCAACGGTAGAGCCTAGTGCAAACGGCTTTATGCCAGTACGTACAGTTAGTGAAGTGTTTAATAGTGATAGTTCGGTTATTATAACTAGGTACGATATTAGGCAAATAGTTAAAGCAGAGTTGTTTTTCGATAATGTAGATGCAACAACATTAACTTTTGATTTAACACCTAGAGTAGTAAATGAATCAGTATACAACGGATTAGAAGTAGGTGATGTAACGTTAGTAGATTTAGGAAATACAACTGATGGAAACTTACCTAAACAAGTTGCACCAGCACCAACATTAATAGATGGTAGATTACAAGTACAACAAAAGATAGGTACATTGTTCTATAAAGATAACATTATACAAAACTTCTTTACATTCTTTGGTAATACTGTATGGACTGAGCCGAATTGGGATTATATTGTAAATTCAGTATACTTTGAAGAATATGGTAATGGAGTTGGAACAAGTGCTAAATTAAAATTTAATTCAGATATGTACGACTTTGAAAACATACGTATGAGAATTACATATATACCTATATTTGATGGCGTATTACACGCTGAAAAGTATTCGGTTGATGATGTAGATAAATTCACTATGATACAGTCTAACCAATCGGCTAGTGCAATAAGTACCGAAAAGGCTTTAAAGTCGTTAGGTGCTGAAATAAACGCTCTAGGAAACAAAGAGATTATGACAACATCACGTATAACATTGTTGGCTGATGAGTTCAACATTGGAGATTTTACAAGTGATGGCTTTATATTAACAAACAAAGAAGTAATATATAACAAAGATGAAATGATAGTACGTTACGAATGGGATAAAGATTACCAAAAACGTAACGAAGATATAGCAGTAGATAGTGCAATTAGATTTTATGCTATTCCACAAGGTGGAGTTAGTAATCGTAAACTATACTACAAAGAATATGTGTACGTTGGGTTTGATGGATTAACAAGCGAATCAACGTTACTTAACACTAGAGGTAGAGAAATATTTACAAATGTGTTCGGTAAAGAAGCACAATACAATACATCAATACAAAACGGTTTTATAACGAACGAGGAAGTCCTTACAACGACTAATCCGATATTGTTGCCTGTTATATCGACTGGTGGTCGAAATGCCTTAAACTTCAATTTTGGGTTTCAATCTCCAATAGTAGCAGGAGAAAGATTAGACTTAACAAGTCAAACTATTCCGTTACTTGAGCCAATTAATTATACGGCTGATGATGGCGAGTTAGAGTTTATTAACTTCGAGTTAGTAGATACGGTAGATGTAACTGACCCAACAACTTTACCATTAACACCATATACTGATCGTGATAACACATTGGTAGGGTCAATATTTAATCAATATTTAGTTAAAAAAGATAGTGCTGAAATAATAGATATATCATATCAAGTACATATGATTCCTAATACTAACATAGTTATAGGTGATTACTTATCAACTAGGAATAACTTAATTGAGAATAAAACAGCGTTTGATGACTTGGTAGTATATTCAAGCGATACATATTATTCACCACAAGAAACAGCAAAAGTTAAAGGTAGTATAGCAACTGGGGTTACAGTATCTAAATTATCTAACGAGATTATTAAAATTAGTTCTAACGTAAATAATACGGCTTGGGCTATCGCAACTACTAATGGTGAGTTAGTTATCGCTGTAAACCAATTTGATGCGTTACAAGATGAAATAAACTTTAAATACTTTAATTCAAGAAACGATATTGATTATTCATTCATTGGTGATGTAATATTCGAGTTACCTGATAGCCCTAGTGATTTAACAGTAACTACAATTAACGCAGGTACATTAGATTTAGAATGGGTAGATAACTCAACTGATGAAACTAACTTCTTGATTTATATAAGCGACAACGGTACTAATTACAATCTATTAGATACAGTAGGGGCAAATGTAACTACATATACATCTGATGGTTTAATGGCTGGTACAACGTATTATTATAGAGTGTTTGCAAGTAATCAAGCAGGAGTAAGTGTAAACTTTGCATCGAACTTCGGTACAACTGATGCCGAGCCTAATCCACCGTTGCCAGTTACTAACTATATTGTAACGGCACAAGATAGCGATAAACTAAATGCTACTTGGACTGGTAGTGCAGGGGCAACTAATTATGTACTAGAAATTAAAAAGAACGTTGATACAATATGGACTGTTGTTGAAATACTAGCAGCATTTGAAAATTATCAATGGAGTGGATTAGATGCGAGTACATTATATGATACTAGAATCAAGGCTAAAAACAGCGAGGGATCAAGTGGTTATAAAAACTATTCAGTATTCACAGGTAGTGGAGTATCACAAACTGCTAGACCAACTATATTAAATGTAGTTGCAGGAGAAACAACAGTAGACTTTGATGTAAGGAACAATGATGGTAGCACAGCAACGGTATATGTAGATTACAATGATAGTACACCTGATAGACAAAGTGATACAGTATCAAGTGGTGGAACTCAATCATTCCAATTTACAGGATTACAAGCCGATACATCATATACACTTTACGCTAAAGCACAAGCAAGTGGCGAAACATTGTCAAGTGCTGATAGTGAGGGGTTTACAACTGACCCATTAAGCACACCTCCAAGTGCACCGACTACATTTACAGGTAGTTTTGCAAGTGGTGGTATACAAATGAATTGGAACAACGTGGCTAATGAAACAGGTTACACAATAGAATTACATTACAATTCAAGTTTCACTAACCTAGCAGTATCAATAGATAAAGCAGCGAACACTACATCTCATTTAGAATCACCGTTAATCACTGGGACATATTGGGCTAGAATTAGAGCATACAATGGTGTGGGTAATAGTGCTTGGAAAGAGAATACCGATAATGGTATTGTAGTTTCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2a391266467922dbda8a8c24ee212272f90bdf798d4048c4d188acc625463c4f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2532
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Horizontal gene transfer and CRISPR targeting drive phage-bacterial host interactions and co-evolution in pink berry marine microbial aggregates Kosmopolous,J.C., Campbell,D.E., Whitaker,R.J. and Wilbanks,E.G. — — GenBank