Protein

View in Explore
Genbank accession
YP_009812075.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MASANVLRTIFTYPISGLGPYTIAFDYLARKFVQVTLLGPDRKLLVLGTDYRFISTKQIQLINAAPSGYGQIEIRRYTDAQDRLVDFQDGSILRATDLNVSQVQTMHIAEEGRDVAGNTLGVDSDGNLDARLRKMVNLLDGVLDGDAVTIRQMKTWSESALNQAGIAKQQADAASASASAAKTSETNSATTAGNSANSATLAQKWAANPQGVLVDATKYSAYHYALAAEGSATSAQGSAQSSSQDAQATAADRVQTGLDRVASDASATKAEQEAAKLGNMNDLAASIYKVGADSTVTFKRGTSGQTITVNDVTNKDLALWSFSPMTVAGLEGALGIGPNYNNVPTDKRQIVIDAKVWTNDFSTGTLRLRDKVDNFTKEFNFSFGTGSIVHVNRTQNIGTLNWNGINLTGANVLDITNNFSAKGGVSAYAATAGLINQGGPTLASSIRDGGTPGGRVRANFDLWVRGAENGQRQGVMRVHGDDMSGEQNWIFIGDGGSAGRISGSAGSVLTDRYPTSDARLKTIDGDSDLEESGKRLDALEFKDYHWNNHEYNKQVGLSTDIQEHGVIAQQAMQVDPRYVEVNEQILGTIYEGRSFDKHVLNWMPMLLDTMAAVKQLRARVKELEVQVNKEE
Physico‐chemical
properties
protein length:631 AA
molecular weight: 67804,54260 Da
isoelectric point:5,39399
aromaticity:0,06815
hydropathy:-0,35214

Domains

Domains [InterPro]
DC_0657
STR
1–622
DC_0657
IPR005604
ATT
20–130
IPR005604 IPR030392
IPR030392
CHP
516–579
IPR030392 Coil
YP_009812075.1
1 631
Architecture
STR
ATT
STR
STR 1-19 | ATT 20-130 | STR 131-627 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage Mysterion
[NCBI] 		2320193 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Aarhusvirus
Host Dickeya solani
[NCBI] 		1089444 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009812075.1 [NCBI]
Genbank nucleotide accession
NC_048060.1 [NCBI]
CDS location
range 34004 -> 35899
strand +
CDS
ATGGCAAGTGCTAACGTGCTGCGAACAATCTTCACGTACCCTATTAGTGGCCTTGGGCCGTATACCATTGCGTTTGACTATCTGGCCCGTAAGTTTGTCCAAGTGACGCTCTTAGGTCCTGACCGTAAGCTTCTGGTGTTGGGTACTGATTATCGCTTTATTTCAACCAAACAGATTCAGCTCATCAATGCTGCTCCTTCTGGTTATGGTCAGATTGAGATTCGTCGTTATACGGATGCTCAGGACCGGCTTGTGGATTTCCAAGATGGCTCAATCCTGCGAGCTACAGACCTTAACGTGTCTCAGGTTCAGACAATGCATATTGCTGAAGAGGGACGTGATGTGGCTGGTAATACTCTTGGCGTTGACTCTGATGGTAACCTTGATGCTCGTCTCCGTAAGATGGTGAACCTGCTTGATGGTGTTCTTGATGGTGACGCTGTGACTATCCGCCAGATGAAGACTTGGAGTGAGTCCGCTTTGAATCAGGCTGGTATCGCTAAGCAACAGGCCGATGCTGCAAGTGCTTCTGCAAGTGCCGCTAAGACCTCAGAGACTAACTCTGCGACTACCGCCGGTAACTCTGCGAACTCTGCAACACTGGCTCAGAAGTGGGCTGCGAACCCTCAAGGTGTTCTTGTGGATGCCACTAAGTATTCAGCGTATCATTATGCCCTGGCTGCTGAAGGTTCCGCTACGAGTGCTCAAGGTTCAGCTCAAAGCTCATCTCAGGATGCTCAGGCGACTGCTGCTGATAGAGTTCAAACAGGTCTTGACCGTGTAGCTTCTGATGCTTCAGCCACTAAGGCAGAGCAGGAGGCCGCTAAGCTTGGTAACATGAATGACCTCGCAGCTTCAATCTACAAGGTTGGTGCGGATAGTACCGTAACATTCAAACGTGGCACAAGCGGCCAGACTATCACTGTTAATGATGTTACTAATAAAGACCTTGCTCTGTGGTCTTTTAGCCCAATGACTGTAGCTGGTCTTGAAGGGGCATTAGGCATTGGTCCTAACTACAATAATGTTCCTACTGATAAGCGCCAAATCGTAATTGATGCTAAGGTGTGGACTAATGATTTTTCTACTGGAACACTTCGTCTTCGTGATAAGGTTGATAATTTTACCAAGGAGTTTAACTTCTCATTTGGTACTGGTAGCATTGTTCATGTAAATAGAACCCAGAACATTGGGACTCTAAATTGGAATGGTATCAACCTAACTGGAGCTAATGTACTTGATATCACTAATAACTTCTCTGCAAAGGGTGGAGTCAGTGCTTATGCTGCTACTGCTGGACTTATCAATCAAGGTGGCCCTACTCTTGCCTCATCTATTAGAGATGGTGGTACTCCGGGTGGGCGAGTTCGTGCTAACTTTGACTTATGGGTTCGTGGTGCGGAGAATGGTCAGCGTCAGGGAGTTATGAGGGTTCATGGTGATGATATGTCTGGTGAGCAAAACTGGATTTTCATTGGTGATGGTGGTAGTGCTGGTCGAATCTCTGGTTCTGCTGGTTCTGTTCTCACTGATAGATACCCAACGTCTGACGCCAGATTGAAGACCATTGATGGTGACTCAGACCTTGAGGAATCTGGTAAGCGTCTTGATGCTCTTGAGTTTAAGGACTATCACTGGAATAACCATGAGTATAACAAGCAGGTTGGCCTGAGCACTGACATTCAGGAACACGGTGTGATTGCTCAGCAGGCTATGCAGGTTGACCCTCGTTATGTTGAGGTTAATGAGCAAATCCTTGGGACCATCTATGAGGGACGCTCTTTTGATAAGCACGTTCTGAATTGGATGCCTATGCTGCTGGATACTATGGCTGCTGTTAAACAGCTTCGTGCTCGTGTTAAAGAGCTGGAGGTGCAAGTAAATAAGGAGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
154ace8b0b10adddf17e0e390d980d0835d71b629e0b5c4ca860bc2ea0372e60
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6585
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
SRE bacteriophages Carstens,A.B., Djurhuus,A.M., Kot,W. and Hansen,L.H. 2015-08-27 — GenBank