Protein

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Genbank accession
WGL32439.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,55
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPMVFIKTLGGSGDLGTAPYIHLINRDENEQYYAVFTGSSIRVFDLTGNEKQVRYPTDGSSYIQTANPRNDLRMVTVADYTFIVNRNVRVTRNTNAVNLAGFNPKQDALINVRGGQYGRTLQIMINGGTQASYQIPDGSQPAHVNNTDAQWLAEELARQCRANTPGWTFNVGQGFIHIIAPAGQQIDSLMTKDGYADQLINPVTHYAQSFSKLPPNAPDGYMVKIVGDSSKSADQYYVRYDATRKVWTETLGWNVNNQLLYETMPHALVRASDGNFEFRWLEWVPKTCGDDDTNPWPSFMDSTINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTARSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSYTSIHRYYAVQDVSSVKNAEDITAHVPNYVPNGVFSICGSGTENFCSVLSHGDPSKIFIYKFLYLNEELRQQSWSHWDFGGNVQVLACQSINSDMYVILRNEFNTFLAKISFTKNAIDLRGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRDTITVLEPDGKITVCEQPTGGWQSDPWLRLSGNLEGREVFIGFNIHFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEESGTFDIYVENQSSNWKYTMAGARLGSNSLRAGRLNLGTGQYRFPVVGNAKFNTVYIVSDATTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 89265,79440 Da
isoelectric point:5,77935
aromaticity:0,11950
hydropathy:-0,35987

Domains

Domains [InterPro]
IPR058003
TTP
1–795
IPR058003
WGL32439.1
1 795
Architecture
TTP
TTP 1-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGL32439.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9908
Central domain 141 349 210 0,2470
C-terminal 350 795 445 0,2032
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-349
C-terminal
350-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PGX1
[NCBI] 		3038274 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGL32439.1 [NCBI]
Genbank nucleotide accession
OQ703770 [NCBI]
CDS location
range 21596 -> 23983
strand +
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGTCAACAGCCTGACATCCTTCGTTATCCCGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTATGGTTTTCATTAAGACACTGGGAGGAAGTGGTGACTTAGGTACTGCGCCTTATATTCACCTGATTAACCGAGATGAGAACGAACAGTATTATGCTGTGTTCACTGGTAGCAGTATCCGTGTGTTCGACCTTACTGGTAACGAGAAGCAGGTGCGTTATCCCACAGACGGCTCTTCGTATATCCAAACAGCCAACCCTAGGAATGACCTGAGGATGGTAACAGTGGCTGACTATACGTTCATCGTCAACCGGAATGTCCGAGTCACAAGGAATACAAACGCTGTGAACCTAGCTGGGTTTAACCCTAAGCAGGACGCTTTGATAAACGTTCGTGGTGGTCAATATGGTCGAACCTTGCAAATTATGATTAACGGCGGCACACAGGCGTCCTATCAGATTCCTGATGGTTCCCAACCAGCGCACGTTAATAATACTGACGCTCAATGGTTGGCAGAAGAGTTGGCTAGACAGTGTAGGGCCAATACGCCGGGATGGACGTTCAACGTTGGTCAAGGTTTCATCCACATTATAGCACCTGCTGGTCAACAGATTGATTCCCTCATGACGAAGGATGGCTACGCTGACCAGTTGATTAACCCTGTTACTCACTACGCTCAGTCGTTCTCTAAGTTGCCGCCTAATGCCCCTGATGGGTACATGGTGAAAATCGTAGGTGATTCCTCTAAGTCTGCCGACCAGTATTATGTTCGGTATGACGCTACACGTAAGGTATGGACTGAGACACTAGGCTGGAACGTTAATAACCAACTACTGTATGAGACCATGCCACACGCTCTTGTACGGGCGTCTGATGGTAACTTTGAGTTCAGGTGGCTCGAGTGGGTACCAAAGACTTGTGGTGATGATGATACCAACCCTTGGCCTTCCTTCATGGACTCTACGATAAATGACGTGTTCTTCTTCCGTAACCGTTTAGGTTTCCTTAGTGGGGAGAACATTATCTTGAGTAGAACAGCTAAGTATTTCAACTTCTACCCAGCGTCCATCGCTAACTTGAGTGATGATGACCCTATCGACGTGGCTGTAAGTACCAACCGAATCGCTATACTTAAGTATGCCGTTCCGTTCTCAGAAGAGTTGCTCATCTGGTCCGACGAAGCACAATTCGTTTTGACTGCATCTGGTACTCTTACTGCGCGTTCCGTTGAGTTGAACCTAACGACTCAATTTGATGTACAGGACCGAGCGAGACCATTCGGGATTGGTCGTAACGTTTACTTTGCGAGTCCAAGGTCCAGCTATACGTCCATCCATCGGTACTACGCAGTGCAGGATGTGAGTTCCGTTAAGAACGCCGAGGACATTACGGCGCATGTTCCTAACTACGTCCCAAATGGTGTGTTTAGTATTTGTGGCAGTGGTACGGAAAACTTCTGTTCTGTACTATCTCACGGGGACCCAAGTAAAATCTTCATCTACAAATTCCTGTACCTTAACGAAGAGTTGAGGCAACAGTCGTGGTCTCATTGGGACTTTGGGGGAAACGTACAGGTTCTGGCTTGTCAGAGTATCAACTCAGATATGTATGTGATTCTTCGCAATGAGTTCAATACGTTCCTAGCTAAAATATCTTTCACTAAGAACGCCATTGACTTACGAGGCGAACCTTACCGTGCCTTTATGGACATGAAGATTCGCTACACGATTCCGAGTGGAACATACAACGATGACACGTTCACTACCTCTATCCATATTCCAACCATTTATGGTGCAAACTTCGGGAGGGACACAATCACCGTATTGGAGCCTGATGGTAAGATAACCGTATGTGAGCAACCAACTGGTGGGTGGCAAAGTGACCCTTGGCTGAGACTCAGCGGTAACTTAGAGGGACGCGAAGTGTTCATTGGGTTCAACATACACTTCGTCTATGAGTTCTCTAAGTTCCTCATCAAGCAAACTGCCGACGATGGGTCTACCTCCACGGAAGACATTGGTCGCTTACAGCTACGCCGAGCGTGGGTTAACTACGAGGAATCTGGTACGTTTGATATTTACGTTGAGAACCAATCATCCAACTGGAAGTACACAATGGCTGGTGCTCGATTAGGCTCTAACAGTCTGAGGGCTGGGCGATTGAACTTAGGGACCGGACAATACCGATTCCCTGTAGTTGGCAACGCCAAATTCAACACCGTATACATCGTGTCAGATGCGACTACCCCTCTTAACATCATTGGGTGTGGATGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
731ff201f4cda8e5e3a3d8aad7291870d3e17b1adb270e944b825ba12145f167
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3163
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and identification of phage PGX1 aganist multidrug-resistant Escherichia coli Hu,D., Li,X. and Qian,P. 2023-09-07 — GenBank