Protein

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Genbank accession
YP_008239674.1 [GenBank]
Protein name
tail fiber adhesin
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSFTYTYQIQGQVVSTNAPLIPFMDNKYDRKAVVRLEEHLKTLPGVDLSGGDVEHFFSDGLYARKLNIPADTVLVGHAHLQGQINFLMKGTIRVTTDEGVKTLTAPQIVVSAAGTKRAGYAITDTTWVTVSATEETDPESVRAAIIATGEDDPRLKEVLCLGVQ
Physico‐chemical
properties
protein length:164 AA
molecular weight: 17835,05580 Da
isoelectric point:5,30117
aromaticity:0,06707
hydropathy:-0,08232

Domains

Domains [InterPro]
DC_0531
STR
16–157
DC_0531
IPR014710
Unmapped
25–138
IPR014710
IPR011051
Unmapped
55–135
IPR011051
YP_008239674.1
1 164
Architecture
STR
STR 16-157 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPMS1
[NCBI] 		1233488 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008239674.1 [NCBI]
Genbank nucleotide accession
NC_021776.1 [NCBI]
CDS location
range 10821 -> 11315
strand +
CDS
ATGAGTTTCACTTATACCTATCAGATTCAAGGTCAAGTGGTTTCGACCAATGCACCCTTGATTCCTTTTATGGATAATAAGTACGACCGCAAAGCTGTTGTCAGACTAGAAGAGCACCTTAAGACACTACCTGGTGTAGACTTGAGTGGCGGCGATGTAGAACACTTCTTCTCTGACGGCTTGTATGCTCGTAAACTTAACATCCCAGCTGATACCGTACTAGTCGGTCACGCACACCTTCAAGGTCAGATTAATTTTCTGATGAAAGGTACTATACGCGTGACTACTGATGAAGGTGTCAAAACTCTCACAGCCCCTCAAATTGTAGTCTCAGCAGCTGGTACTAAACGTGCAGGCTATGCTATTACGGATACAACTTGGGTAACAGTCAGTGCAACCGAAGAGACTGACCCAGAATCAGTTCGTGCTGCCATAATCGCTACTGGCGAGGATGACCCACGACTTAAGGAGGTCTTATGTCTTGGGGTGCAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1f21e83de6e13344640eeba9806decf881c33c32b102735ca09b4800217431ff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7660
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50