Protein

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Genbank accession
WYX90314.1 [GenBank]
Protein name
putative central straight fiber
RBP type
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MISNNAPAKMVLNSIMTGYTMAYIQHSIYTDYDVIGRSFWLKLGEEVDRRDFTGIDTFFVMINNLTPSTTYQVQGAFYDSIIDSELLNAKIGINLSNETNFKTKEKPIIVTARSESEPVDVGVGAPIVVVETTGEASYCTIELKSTATEDSPWTKYYIGALGSTIKFGGVPIGDYKIRISGQVTMPDGVTVDSSGYYEFPNILTVAYNFVPPTAPIDIVFKAARIADGKERYDVRIEWDWERGAGANVREFLVTYINSEEYAKTGWAKAQKINVGAARAATIISFPWRVEHTFKVSSIAWGPNKQDITESAPVTFILNEDTPLDNSFVNETGIDVNYAFIKGSMKDGEIWRQTFLIDAATGAINIGLLDEEGKAPISFDPINRVVNVDGKVITRDINAANFIMTNLSGKDNPAIYTQGKSWGDNNSGIWMGMDNTSAKAKLDIGNATQWIRYDGTTLRISSGVVIGTPNGDVDIGTGLQGKQTVFVYKLATSLPAKPLEQDYPPPGWSKTPPNRTDMTQNIYTTTGTLDPVTNKLLEGTSWSDVVQWSGTEGTIGHDGQRGPGMYSMGIPGLGGWDDGQANAFFQNNFGKPPVKYDVLTQFNSNAPQTAFTRQWNGAGWINPAMVLHGNMIVNGTVTADKIVAGNAFLSQIGVNIIYDRNAALSGNPEAYYKMKIDLNSGYIHIR
Physico‐chemical
properties
protein length:685 AA
molecular weight: 74985,49440 Da
isoelectric point:4,97133
aromaticity:0,10365
hydropathy:-0,23533

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
103–197
IPR057551
WYX90314.1
1 685
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-335 | STR 350-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYX90314.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 408 408 0,8842
Central domain 409 607 200 0,1558
C-terminal 608 685 77 0,4389
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-408
Central
409-607
C-terminal
608-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage KKP_3822
[NCBI] 		3027681 Uroviricota > Caudoviricetes >
Host Salmonella enterica subsp. enterica serovar Manchester
[NCBI] 		915158 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYX90314.1 [NCBI]
Genbank nucleotide accession
OQ674104 [NCBI]
CDS location
range 31216 -> 33273
strand +
CDS
ATGATTTCGAATAATGCACCAGCCAAGATGGTCTTAAATAGTATTATGACTGGATATACTATGGCGTATATCCAGCATTCTATCTATACCGACTACGATGTTATCGGTAGATCATTCTGGCTTAAACTTGGCGAAGAAGTGGATAGAAGAGATTTCACTGGAATCGACACTTTCTTTGTTATGATCAATAACTTAACTCCCTCAACTACCTATCAGGTTCAGGGAGCTTTTTATGACTCAATTATTGACTCAGAACTTTTAAATGCAAAAATTGGTATTAACCTCTCTAATGAAACTAACTTTAAAACAAAAGAGAAGCCAATAATTGTTACAGCAAGGTCTGAGTCAGAACCAGTGGATGTTGGGGTGGGCGCACCGATAGTTGTTGTGGAAACTACTGGTGAAGCAAGTTACTGTACTATTGAGTTAAAAAGTACAGCCACGGAAGATAGTCCTTGGACTAAGTATTACATTGGGGCTTTAGGTTCTACTATTAAATTTGGTGGAGTTCCTATAGGAGATTATAAGATCAGAATATCTGGTCAAGTAACTATGCCTGATGGTGTTACAGTTGATTCTTCTGGTTACTATGAGTTCCCTAATATTCTAACTGTAGCTTATAATTTTGTTCCTCCTACTGCACCTATCGATATTGTTTTTAAAGCTGCACGAATTGCTGATGGTAAAGAACGATATGATGTTAGAATTGAGTGGGATTGGGAACGCGGTGCTGGTGCTAACGTTCGTGAGTTCTTGGTTACTTATATAAATTCCGAGGAATACGCTAAGACTGGCTGGGCTAAAGCTCAAAAGATAAACGTGGGCGCTGCTAGAGCTGCAACAATTATATCATTCCCATGGAGAGTTGAACATACGTTTAAGGTATCATCAATTGCCTGGGGACCAAATAAACAAGATATAACCGAGTCAGCTCCTGTAACATTTATTCTGAATGAAGATACTCCTCTAGATAATAGTTTTGTCAATGAGACGGGTATTGATGTTAACTATGCCTTTATTAAAGGCAGCATGAAAGATGGGGAAATCTGGAGACAAACATTCCTAATTGATGCAGCTACTGGTGCTATTAACATTGGTCTGCTCGATGAAGAAGGTAAAGCACCTATTTCTTTCGACCCTATAAACCGTGTTGTTAACGTTGATGGTAAAGTAATTACTAGAGATATTAATGCTGCGAACTTTATCATGACTAACTTGTCTGGTAAAGATAACCCAGCAATTTATACTCAAGGTAAATCCTGGGGGGATAATAACTCTGGTATTTGGATGGGTATGGATAATACCTCTGCCAAAGCTAAATTAGACATTGGTAATGCTACACAATGGATACGTTATGATGGCACTACTCTGCGTATTTCTAGTGGTGTAGTAATTGGAACACCAAATGGTGACGTAGATATTGGAACTGGTTTACAAGGTAAGCAAACAGTATTTGTTTATAAGTTAGCAACATCTCTACCAGCTAAACCGCTAGAACAAGATTATCCACCTCCTGGTTGGTCAAAAACTCCACCTAATCGTACAGATATGACACAAAATATCTATACTACTACGGGTACACTTGATCCAGTTACTAACAAACTTCTTGAAGGTACTAGCTGGTCTGATGTGGTTCAGTGGAGCGGTACTGAAGGTACTATAGGACATGATGGACAGCGTGGTCCTGGGATGTACTCCATGGGTATTCCTGGATTAGGTGGTTGGGATGATGGACAGGCTAATGCATTCTTCCAAAATAACTTTGGAAAACCTCCGGTTAAGTATGATGTTCTAACACAATTTAACAGTAATGCTCCGCAAACAGCATTTACCCGTCAATGGAACGGAGCTGGATGGATTAACCCTGCAATGGTTCTTCATGGCAATATGATTGTTAATGGAACTGTAACTGCGGATAAGATTGTGGCAGGAAATGCCTTCTTATCACAAATAGGTGTTAATATAATCTACGATAGAAATGCTGCGTTATCAGGGAACCCTGAAGCATACTACAAGATGAAGATAGACCTAAATAGTGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
597823c807bc3e5e1dc2dcb25dd3b09b5e88bff2db36bd7591e16cb8a8ad7f8f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7913
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Newly Isolated Salmophages for Biocontrol of Salmonella in Ready-To-Eat Plant-Based Food Wojcicki,M., Swider,O., Srednicka,P., Ilczuk,T., Koperski,L., Shymialevich,D., Cieslak,H., Sokolowska,B. and Juszczuk-Kubiak,E. 2013 — GenBank