Protein

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UniProt accession
A0A2H5BQA0 [UniProt]
Protein name
Putative pectate lyase
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSTLRVDTLQKPDNSVTVNLEDIITEVNLGDTTSPAKGAGLVGFSSSVSYPDGTVGAEILEVSSKIGVTVKDYGAVGDGVTDDTVAIQAAITAVGQYKDLGWPSGTYLITQKLVMPTGQRWVGAGGQRGATIKKGANIDMVEVGTLCTVLDISLEGEGATYSGKGFVIASGFSQNLVRCRAVNMGGEPLYFANNAGGGANVTAFEGYPVDTDTYAGCVIAGDTSPHPRFFRGMWLSGANFALGPGAGNGGSMTQFYIRDLRFDPTSTLFHISNGRCATLGATTTLKGFDHSIDGVAFAGPVALDSAQGINLGPSCSVPSLTENATNSQYNSVYVQRRTYTPTWTQTSATPAIGNGTLTGNYVRAGHMCHVQIELVAGSTTTFGDAASGYRFSLPFPGHLSFNQRGFPVRIYDTSASADFTGWASIGAGQDYITISVGAQQVRSTSPMTWATGDTLHCSFSYMTR
Physico‐chemical
properties
protein length:464 AA
molecular weight: 48537,59570 Da
isoelectric point:5,36113
aromaticity:0,09267
hydropathy:-0,04677

Domains

Domains [InterPro]
DC_2249
ATT
2–190
DC_2249 DC_1128
IPR012334
STR
57–389
IPR012334
IPR011050
STR
67–319
IPR011050
IPR024535
ENZ
69–143
IPR024535
A0A2H5BQA0
1 464
Architecture
ATT
STR
RBD
ATT 2-190 | STR 191-389 | RBD 395-464
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A2H5BQA0
1 464
Domain Start End Length (AA) Confidence
N-terminal 1 84 84 0,9756
Central domain 85 324 241 0,9864
C-terminal 325 464 139 0,9874
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-84
Central
85-324
C-terminal
325-464

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage TC6
[NCBI] 		2060947 Uroviricota > Caudoviricetes > Zobellviridae > Paundecimvirus PA11 >
Host Pseudomonas aeruginosa PA1
[NCBI] 		1279007 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0016829 lyase activity Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
ba9506e9ee9f10b3ce6949057f49fa1c1aeaec2ca83753cae82d0d45ef2fbc49
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8402
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50