Protein

View in Explore
Genbank accession
UYD60666.1 [GenBank]
Protein name
long-tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MLGQHFRATSGLDAAGEKLINVAIADKATLSDGVNVDFFHKYNTIYQYDPLRGYDAKHAIIYQRRIYFAKADIASPAGEFQPTLWTGLRVDPTWQFVNSVATAMQLVSGQYISADNRFNNLVFNLPTDPIDGDTIVIKDIGGMPGIKDLVFSTIGAAIIEYNGQTRGSSFRGTIPFCEYVFMYKAAGNRWQLDVCASTEQSYFVAPSAQGFQLQSGMVTWRQTAQGQIRLILPKHANHGDVISTHDIDGLNPINHSTLEVYPGSGHSINENGVTLIESRTSGYGSFVFDSGSKTWEVWDGDQRTRIRVTKADTAVLPFEHILVTGDGTAANQTVVLTLPEDVAIGDRVQITMDYLRRGQTCTIRVKPGSGEVMVGSKAQMQFQRRSEYPASNGWELVSSVSIVANTDYVPYIELMYAELDPALVGVTPARYGWMIGQVAPKVERVDANQRDRLGVAALAAQSEVDKNHEQNPNDETIVTPRTLSRKTSTETRRGILRIGTTAEVNQVTTASYLDDVAITPKKLNERSATETRRGLAEIATQAEANGATDDITIVTPKKLHNRIAAENQTGILAIVKKLGTAGTARNLAGTGVYNRADHLRAVTPATLDGFIATETAKGVGYIATQAEVDGGSSDINGPLFVTAERLGARRASETNHGLIEIATQTETNAGTDDTRAITPKKLNDRIATESRTGIARLATQTEVDAGTSALTILTPLKLKTRFDNLSRIEVDAGTGLIRSGTIWDTVSIGIKLSTEVQRGTLRVATQVEANGSTDDSTIITPKKLAGRKSTRTLDGIIRVATTAETRAGTSQTQAVCPQDLIYMIQTEPTWSGNETRRGSVKTATMDSTFVGNDTVGSTQAYTTYANDGLAVSPRGLNYALRNFLPLNATAQNSLALGGVNAVDWVRRTVAQTVTGAMNFTAAMTAANITSNVTSVSSLRVRDGNLGAVEIGAQGASVLGTGILMHAADGSGAANDWFMYSGGRSSVLGVNEIGFVSTNADNTSLTKQFSVSRDGDSTTNRHIRSTNGHLVLENSGARIYVGGGIATTNQLAQSIASGFIFGNINSTMSVVTNGDDNFKINGSVVINTANAQTKLDPVYLRRDGGNTQTGKVLAAMNGDVKYSTFRNDNRYISSRGNDFVFGNTDTVNGRVCLDTNKNPIVKIGNFEYEIYHKGNKPTAEDVGAVDITGSSANNLTIRDWIKIGNVKIIANNLLKTVEFVWEE
Physico‐chemical
properties
protein length:1222 AA
molecular weight: 131562,69480 Da
isoelectric point:6,33928
aromaticity:0,06710
hydropathy:-0,25098

Domains

Domains [InterPro]
DC_1946
ATT
1–207
DC_1946 DC_1209
UYD60666.1
1 1222
Architecture
ATT
STR
ATT 1-207 | STR 346-1211 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD60666.1
1 1222
Domain Start End Length (AA) Confidence
N-terminal 1 834 834 0,8456
Central domain 835 1033 200 0,1616
C-terminal 1034 1222 188 0,7895
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-834
Central
835-1033
C-terminal
1034-1222

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM1
[NCBI] 		3246724 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD60666.1 [NCBI]
Genbank nucleotide accession
OP380606 [NCBI]
CDS location
range 52113 -> 55781
strand +
CDS
ATGCTAGGACAACACTTCCGAGCGACCAGCGGCTTAGATGCGGCTGGCGAAAAATTAATCAACGTTGCTATAGCAGACAAGGCTACCCTGTCTGACGGCGTCAACGTTGATTTCTTCCACAAATACAATACAATTTACCAGTACGACCCGTTACGCGGGTACGACGCGAAACACGCGATCATATATCAGCGGCGCATATACTTTGCGAAAGCAGATATAGCTTCTCCAGCCGGAGAATTCCAACCGACCCTTTGGACCGGACTTCGTGTCGACCCAACATGGCAGTTCGTGAACTCGGTTGCAACTGCGATGCAACTTGTTTCAGGTCAATATATCTCAGCAGATAACCGTTTCAACAACCTGGTATTCAATCTGCCTACTGATCCGATTGACGGGGATACAATCGTAATAAAAGATATCGGCGGGATGCCTGGGATAAAAGATCTGGTATTCTCGACTATCGGCGCAGCCATCATCGAGTATAATGGACAAACTCGTGGAAGCAGTTTCCGCGGAACTATCCCATTCTGCGAATACGTTTTCATGTACAAAGCTGCCGGAAATCGCTGGCAACTTGACGTATGTGCATCAACTGAGCAAAGTTATTTTGTTGCCCCGTCTGCACAAGGTTTCCAACTACAATCCGGCATGGTTACATGGCGTCAGACTGCTCAAGGCCAGATCCGTCTGATTTTGCCAAAGCACGCTAACCACGGCGACGTCATATCTACCCATGATATTGACGGGCTTAATCCAATAAACCACTCAACACTTGAAGTTTACCCAGGAAGTGGTCATAGCATAAACGAAAACGGCGTAACATTGATCGAATCGCGTACATCAGGTTATGGCTCGTTTGTATTTGATTCCGGGTCTAAAACATGGGAAGTTTGGGACGGCGACCAAAGAACGCGTATCCGGGTAACAAAAGCCGACACCGCGGTTTTGCCGTTTGAGCATATTCTGGTTACTGGTGACGGCACTGCCGCTAACCAAACTGTCGTATTGACCCTCCCAGAAGACGTTGCTATCGGTGACCGTGTTCAAATAACAATGGACTACTTGCGCCGTGGCCAGACTTGCACGATTCGGGTTAAACCGGGTTCAGGCGAGGTTATGGTCGGGTCTAAAGCCCAGATGCAATTCCAACGCCGTTCAGAATATCCCGCGTCTAATGGTTGGGAACTTGTTTCCTCTGTGTCAATTGTTGCAAACACCGATTATGTTCCATATATCGAATTGATGTACGCCGAACTTGACCCAGCTTTGGTTGGTGTTACGCCTGCCCGTTACGGTTGGATGATCGGCCAAGTTGCTCCAAAAGTTGAACGGGTTGACGCAAATCAACGTGACCGGCTCGGCGTTGCTGCCCTGGCGGCCCAAAGTGAAGTTGATAAAAACCACGAGCAAAATCCAAATGACGAGACAATTGTCACACCTCGGACTCTGTCGCGGAAAACATCTACCGAAACTCGTCGCGGAATTCTGCGTATCGGCACAACTGCTGAGGTAAACCAAGTCACAACCGCGTCTTATCTGGACGATGTTGCAATAACTCCGAAAAAACTGAATGAGCGTTCAGCTACCGAAACTCGTCGAGGTCTGGCTGAAATCGCTACGCAGGCAGAAGCGAATGGAGCAACCGACGATATCACCATCGTTACGCCGAAAAAGCTGCACAACAGAATTGCTGCTGAAAACCAGACTGGTATATTGGCTATCGTCAAGAAGCTCGGCACGGCAGGAACTGCGAGAAATCTGGCTGGTACCGGTGTTTATAACCGTGCTGATCATTTACGGGCAGTCACACCAGCAACCCTGGATGGGTTTATCGCAACTGAAACTGCTAAGGGTGTAGGATATATCGCTACCCAGGCTGAAGTTGACGGTGGATCATCGGATATAAACGGCCCATTGTTTGTTACTGCGGAAAGACTTGGTGCCCGACGTGCTTCGGAGACAAACCATGGTTTGATTGAAATTGCTACCCAAACCGAAACAAACGCCGGTACTGATGACACTCGTGCCATTACTCCGAAAAAGTTAAATGATCGTATTGCTACCGAATCTCGTACTGGTATTGCTCGTTTGGCTACCCAGACTGAAGTAGACGCTGGAACATCGGCTCTCACTATCTTAACCCCGTTGAAATTGAAAACGAGATTTGATAATCTTTCTCGCATTGAAGTAGACGCTGGCACTGGATTGATCCGTTCTGGAACCATTTGGGACACCGTATCGATTGGTATCAAGCTATCGACCGAGGTTCAGCGCGGAACATTGCGCGTAGCGACACAAGTTGAAGCGAACGGTTCGACCGATGATTCAACCATTATAACACCAAAGAAATTAGCCGGGCGTAAGTCTACTCGAACTTTGGATGGTATTATTCGAGTTGCTACTACAGCCGAAACAAGAGCCGGTACTTCACAGACTCAGGCTGTTTGTCCGCAAGATTTGATCTACATGATTCAAACCGAGCCTACCTGGTCTGGTAATGAAACTCGACGTGGTTCTGTTAAAACTGCTACAATGGACTCAACATTCGTCGGTAACGACACCGTTGGTTCAACACAAGCATACACAACATATGCGAATGACGGGCTTGCCGTTAGTCCACGTGGTTTGAACTATGCTTTGCGCAACTTCTTACCGCTCAATGCTACCGCGCAAAACTCATTGGCACTTGGTGGTGTTAACGCTGTTGATTGGGTACGTCGAACAGTTGCTCAAACCGTTACAGGCGCGATGAACTTTACAGCTGCAATGACTGCTGCAAACATCACATCAAATGTGACGTCGGTTTCAAGCCTAAGAGTTCGCGATGGCAATTTAGGTGCAGTTGAAATCGGGGCTCAAGGCGCTAGTGTTTTGGGAACCGGTATATTGATGCACGCTGCTGATGGCTCTGGCGCTGCAAACGACTGGTTCATGTATTCCGGTGGTCGGTCATCTGTTCTGGGTGTTAATGAAATTGGTTTTGTTTCTACAAATGCCGATAACACAAGTTTAACAAAGCAATTTAGCGTTAGTCGCGATGGAGACTCAACAACAAATAGACATATCCGTTCAACGAATGGTCACCTTGTTCTTGAAAACTCAGGAGCGAGAATATACGTTGGCGGCGGAATTGCTACCACAAACCAGCTGGCACAGTCAATAGCCAGTGGGTTTATTTTCGGCAATATCAACTCCACAATGTCTGTTGTAACCAATGGTGATGATAACTTCAAAATCAACGGTTCTGTAGTTATTAACACTGCTAATGCTCAAACTAAACTCGACCCAGTTTATCTGCGCCGCGACGGTGGTAACACCCAAACCGGTAAAGTTCTCGCAGCAATGAATGGCGATGTTAAATACAGCACATTCCGAAATGATAATCGTTACATCTCTTCGCGAGGAAACGACTTCGTATTTGGTAACACTGACACAGTAAATGGCCGTGTATGTCTTGACACAAACAAAAACCCAATTGTTAAGATTGGTAACTTTGAGTATGAGATTTATCACAAAGGTAACAAGCCAACAGCTGAAGACGTTGGAGCTGTAGATATCACCGGTTCATCAGCAAACAACCTCACAATTCGCGATTGGATAAAGATTGGCAACGTTAAAATCATTGCTAATAACCTTTTGAAAACCGTTGAATTTGTTTGGGAAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
50ccc15be7928adbf6e0317283eec981ff55603e9b8e7498b5c204bf3226b6f3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5409
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank