Protein

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Genbank accession
WDR21909.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MEKMMASFGNGYTKTQVISENNSIKYKISFAAGSVFSTPSSAYFTFQDNPIGNQQDGAGINIRVFNPALNTVSAKKTFLLTPNDNDPGNRAFIEYLSTFTQDNTNLLIFTTSGDIKTSNLVENKFKSIYSTMWPNKWMTSRYSCTYCGLFSIKNNKIIAENVTYSDGVLRDEDIRPALEFVYDKADDIGATGFSYRAVEDFEEYTSSAATIKRYPVDSASGVEISSIGISPGDILFWSFEFLHGDNIPPEVPGTNNNKIRIEIRWLNSSGGWIKSVNVDSNHANAGKWIQHEQTVEVPADAARIVILASKTTPTDTVGTGGVRSMILTETSRATEALTSPSAISVNGIRLNTIVSGDNPTLLILPANEVDSTGKPLPGEDVSGIIYSSDWREFEKNI
Physico‐chemical
properties
protein length:397 AA
molecular weight: 43545,09570 Da
isoelectric point:4,92597
aromaticity:0,09824
hydropathy:-0,28212

Domains

Domains [InterPro]
DC_0912
STR
1–397
DC_0912
PS52031
LEC
22–197
PS52031
WDR21909.1
1 397
Architecture
STR
STR 1-397
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDR21909.1
1 397
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,3847
Central domain 142 386 246 0,5699
C-terminal 387 397 10 0,2255
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-386
C-terminal
387-397

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenM_UTK0003
[NCBI] 		3028906 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDR21909.1 [NCBI]
Genbank nucleotide accession
OQ359887 [NCBI]
CDS location
range 147612 -> 148805
strand +
CDS
ATGGAAAAAATGATGGCGAGTTTTGGTAACGGATATACCAAAACTCAAGTTATTTCTGAAAATAATTCCATCAAATACAAAATTTCATTTGCTGCGGGGTCGGTTTTTTCGACCCCTTCTTCTGCTTATTTTACCTTTCAGGATAATCCAATAGGTAACCAGCAAGATGGTGCTGGTATAAATATCAGAGTTTTTAATCCAGCATTGAATACTGTATCTGCTAAGAAAACATTTTTATTGACACCCAATGATAATGACCCAGGCAATAGAGCATTCATTGAATATTTGTCAACATTTACTCAAGATAATACTAACTTGTTAATATTCACCACATCAGGTGATATTAAAACGAGCAATTTAGTAGAGAATAAATTTAAGTCCATTTATTCAACTATGTGGCCAAATAAATGGATGACATCTCGGTATTCATGTACTTATTGCGGTTTATTTTCAATAAAAAATAATAAAATTATTGCCGAAAACGTAACATATTCTGATGGAGTTCTTCGGGACGAAGACATCAGACCTGCTTTAGAATTCGTTTATGATAAAGCTGATGATATTGGAGCTACCGGGTTTTCTTATAGAGCTGTTGAAGATTTTGAAGAATACACTAGTTCCGCAGCAACAATAAAAAGATATCCAGTTGATTCTGCTTCGGGCGTAGAAATTAGCTCAATTGGAATATCTCCTGGCGATATTCTGTTCTGGTCATTTGAATTTTTGCATGGAGATAATATTCCGCCGGAAGTTCCAGGGACAAATAATAATAAAATAAGAATAGAAATAAGATGGTTAAATTCATCTGGAGGGTGGATTAAATCAGTTAATGTTGACTCTAACCACGCAAATGCTGGAAAATGGATACAGCACGAACAAACTGTTGAAGTCCCTGCTGACGCTGCCCGGATAGTTATTCTTGCTTCTAAAACTACTCCAACTGATACGGTCGGTACTGGAGGTGTTCGTAGTATGATTTTAACTGAAACTTCGCGAGCTACTGAGGCATTAACTTCTCCATCTGCGATATCAGTTAATGGTATTCGTTTGAATACTATAGTTTCAGGAGATAACCCGACGCTGCTTATTTTACCTGCTAACGAAGTTGATTCAACTGGCAAACCATTACCAGGTGAAGATGTTTCAGGAATAATTTACAGTTCTGATTGGAGAGAGTTTGAGAAAAATATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e523b87fab880009bfc175b550453737fefd5bb3e6192f95b5fea5240bf9263
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6326
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Hudson,L.K., Wang,J., Bryan,D.W. and Denes,T.G. — — GenBank