Protein
- UniProt accession
- A0A6J5S4X1_9CAUD [UniProt]
- Protein name
- Collagen triple helix repeat
- RBP type
-
TF
evidence: RBPdetect
probability: 0,9308
TF
evidence: RBPdetect2
probability: 0,9106
- Protein sequence
-
MSANKVTINQTNNTVDISSPGPQGATGAQGIQGVQGAQGTTGAQGTTGIQGATGLQGTTGAQGVQGVQGTTGIQGAQGVQGRQGTTGAQGTTGTQGTQGLQGRQGTTGATGSQGTQGLLGLQGTTGAQGTIGIQGTDGTQGLVGAQGTQGIQGIQGLLGLQGTTGAQGTQGVQGTQGLLGVQGTQGLAIQGTAGTGVNILGSYPSYAALVLAHPTGSPGDAYLVNGDLYVWDVTTSGWINVGNIQGPQGLTGLQGITGSQGITGLQGTTGLQGLTGAQGANGTQGVTGIQGLSGIQGTDGTQGIVGVQGLTGTQGLSGIQGANGTQGTTGSQGLTGTQGAQGTQGVLGTQGAVGAQGTQGVIGSQGLDGTQGTQGVLGTQGTQGLLGLQGLTGLQGLTGLQGLTGLQGTDGLTGSQGVQGITGTGIQGTTGLQGTQGILGTGVQGTAGANGNAYIVDYLDGGSASIIPDIVYNAGTSTTSSWTYTIDASGATVSF
- Physico‐chemical
properties -
protein length: 495 AA molecular weight: 46840,32330 Da isoelectric point: 4,05003 aromaticity: 0,02424 hydropathy: -0,12465
Domains
Domains [InterPro]
IPR050149
20–204
20–204
1
495
Legend:
Pfam
SMART
CDD
TIGRFAM
HAMAP
SUPFAM
PRINTS
Gene3D
PANTHER
Other
Taxonomy
Name | Taxonomy ID | Lineage | |
---|---|---|---|
Phage |
uncultured Caudovirales phage [NCBI] |
2100421 | Uroviricota > Caudoviricetes > environmental samples > |
Host | No host information |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAB4178259.1
[NCBI]
Genbank nucleotide accession
LR796960
[NCBI]
CDS location
range 34695 -> 36182
strand -
strand -
CDS
ATGAGCGCCAATAAAGTTACGATCAATCAAACCAACAACACGGTTGACATATCAAGCCCGGGCCCGCAAGGCGCAACCGGCGCACAAGGCATCCAAGGTGTGCAAGGCGCACAAGGCACCACAGGCGCACAAGGCACCACTGGAATCCAAGGTGCGACTGGATTGCAAGGCACGACCGGCGCCCAAGGCGTGCAAGGTGTGCAAGGCACGACTGGCATTCAGGGCGCACAGGGTGTGCAGGGTCGCCAAGGCACAACGGGCGCACAAGGCACAACGGGTACTCAAGGCACTCAAGGCTTGCAGGGGCGGCAAGGAACCACAGGCGCCACGGGCAGCCAAGGCACACAAGGCTTGCTTGGTTTGCAAGGGACTACCGGCGCACAAGGAACAATCGGAATCCAAGGCACAGACGGCACTCAAGGTTTAGTCGGAGCACAGGGAACACAAGGTATTCAAGGAATCCAAGGCTTGCTTGGCTTGCAAGGCACAACTGGAGCGCAAGGCACGCAAGGTGTGCAAGGCACTCAAGGTTTGTTGGGCGTTCAAGGCACGCAGGGCCTAGCGATTCAAGGCACAGCTGGAACTGGCGTCAATATTCTTGGTTCTTACCCTAGCTACGCCGCTTTGGTTTTAGCCCATCCAACCGGCAGCCCCGGCGATGCCTATTTAGTTAATGGCGATTTGTACGTTTGGGATGTGACCACTTCTGGTTGGATAAATGTTGGCAACATTCAAGGACCACAAGGCTTAACTGGGTTGCAGGGCATAACGGGCAGCCAAGGGATTACTGGCCTTCAGGGCACGACTGGCTTGCAAGGTCTAACCGGCGCCCAAGGCGCAAACGGCACTCAAGGCGTTACTGGAATCCAAGGCCTTAGTGGCATACAAGGCACAGACGGAACACAAGGAATAGTCGGTGTTCAAGGTTTAACTGGGACACAGGGTTTAAGTGGCATACAAGGCGCGAACGGCACCCAAGGCACCACAGGCTCACAGGGTCTTACTGGAACGCAGGGCGCTCAAGGGACGCAGGGCGTTCTTGGTACGCAGGGAGCAGTAGGGGCACAAGGCACTCAAGGCGTTATCGGCTCACAGGGGCTTGATGGGACTCAAGGAACGCAGGGTGTTCTTGGAACGCAGGGCACTCAAGGCTTACTAGGCTTGCAGGGATTAACTGGCCTGCAGGGATTAACTGGCCTCCAAGGGCTAACTGGCTTGCAGGGAACAGACGGCCTAACTGGCTCTCAGGGTGTTCAAGGCATAACCGGCACTGGCATCCAAGGAACAACAGGCTTGCAAGGCACGCAAGGCATTTTGGGGACTGGAGTGCAAGGCACTGCTGGTGCGAATGGCAATGCCTACATTGTGGACTATCTGGATGGTGGCAGTGCATCAATCATCCCAGACATCGTTTACAACGCAGGGACTTCTACAACAAGCAGTTGGACATACACGATTGATGCTAGCGGCGCAACAGTTTCATTCTAA
Genbank protein accession
CAB4202475.1
[NCBI]
Genbank nucleotide accession
LR797313
[NCBI]
CDS location
range 11423 -> 12910
strand -
strand -
CDS
ATGAGCGCCAATAAAGTTACGATCAATCAAACCAACAACACGGTTGACATATCAAGCCCGGGCCCGCAAGGCGCAACCGGCGCACAAGGCATCCAAGGTGTGCAAGGCGCACAAGGCACCACAGGCGCACAAGGCACCACTGGAATCCAAGGTGCGACTGGATTGCAAGGCACGACCGGCGCCCAAGGCGTGCAAGGTGTGCAAGGCACGACTGGCATTCAGGGCGCACAGGGTGTGCAGGGTCGCCAAGGCACAACGGGCGCACAAGGCACAACGGGTACTCAAGGCACTCAAGGCTTGCAGGGGCGGCAAGGAACCACAGGCGCCACGGGCAGCCAAGGCACACAAGGCTTGCTTGGTTTGCAAGGGACTACCGGCGCACAAGGAACAATCGGAATCCAAGGCACAGACGGCACTCAAGGTTTAGTCGGAGCACAGGGAACACAAGGTATTCAAGGAATCCAAGGCTTGCTTGGCTTGCAAGGCACAACTGGAGCGCAAGGCACGCAAGGTGTGCAAGGCACTCAAGGTTTGTTGGGCGTTCAAGGCACGCAGGGCCTAGCGATTCAAGGCACAGCTGGAACTGGCGTCAATATTCTTGGTTCTTACCCTAGCTACGCCGCTTTGGTTTTAGCCCATCCAACCGGCAGCCCCGGCGATGCCTATTTAGTTAATGGCGATTTGTACGTTTGGGATGTGACCACTTCTGGTTGGATAAATGTTGGCAACATTCAAGGACCACAAGGCTTAACTGGGTTGCAGGGCATAACGGGCAGCCAAGGGATTACTGGCCTTCAGGGCACGACTGGCTTGCAAGGTCTAACCGGCGCCCAAGGCGCAAACGGCACTCAAGGCGTTACTGGAATCCAAGGCCTTAGTGGCATACAAGGCACAGACGGAACACAAGGAATAGTCGGTGTTCAAGGTTTAACTGGGACACAGGGTTTAAGTGGCATACAAGGCGCGAACGGCACCCAAGGCACCACAGGCTCACAGGGTCTTACTGGAACGCAGGGCGCTCAAGGGACGCAGGGCGTTCTTGGTACGCAGGGAGCAGTAGGGGCACAAGGCACTCAAGGCGTTATCGGCTCACAGGGGCTTGATGGGACTCAAGGAACGCAGGGTGTTCTTGGAACGCAGGGCACTCAAGGCTTACTAGGCTTGCAGGGATTAACTGGCCTGCAGGGATTAACTGGCCTCCAAGGGCTAACTGGCTTGCAGGGAACAGACGGCCTAACTGGCTCTCAGGGTGTTCAAGGCATAACCGGCACTGGCATCCAAGGAACAACAGGCTTGCAAGGCACGCAAGGCATTTTGGGGACTGGAGTGCAAGGCACTGCTGGTGCGAATGGCAATGCCTACATTGTGGACTATCTGGATGGTGGCAGTGCATCAATCATCCCAGACATCGTTTACAACGCAGGGACTTCTACAACAAGCAGTTGGACATACACGATTGATGCTAGCGGCGCAACAGTTTCATTCTAA
Genbank protein accession
CAB4214617.1
[NCBI]
Genbank nucleotide accession
LR797410
[NCBI]
CDS location
range 33838 -> 35325
strand -
strand -
CDS
ATGAGCGCCAATAAAGTTACGATCAATCAAACCAACAACACGGTTGACATATCAAGCCCGGGCCCGCAAGGCGCAACCGGCGCACAAGGCATCCAAGGTGTGCAAGGCGCACAAGGCACCACAGGCGCACAAGGCACCACTGGAATCCAAGGTGCGACTGGATTGCAAGGCACGACCGGCGCCCAAGGCGTGCAAGGTGTGCAAGGCACGACTGGCATTCAGGGCGCACAGGGTGTGCAGGGTCGCCAAGGCACAACGGGCGCACAAGGCACAACGGGTACTCAAGGCACTCAAGGCTTGCAGGGGCGGCAAGGAACCACAGGCGCCACGGGCAGCCAAGGCACACAAGGCTTGCTTGGTTTGCAAGGGACTACCGGCGCACAAGGAACAATCGGAATCCAAGGCACAGACGGCACTCAAGGTTTAGTCGGAGCACAGGGAACACAAGGTATTCAAGGAATCCAAGGCTTGCTTGGCTTGCAAGGCACAACTGGAGCGCAAGGCACGCAAGGTGTGCAAGGCACTCAAGGTTTGTTGGGCGTTCAAGGCACGCAGGGCCTAGCGATTCAAGGCACAGCTGGAACTGGCGTCAATATTCTTGGTTCTTACCCTAGCTACGCCGCTTTGGTTTTAGCCCATCCAACCGGCAGCCCCGGCGATGCCTATTTAGTTAATGGCGATTTGTACGTTTGGGATGTGACCACTTCTGGTTGGATAAATGTTGGCAACATTCAAGGACCACAAGGCTTAACTGGGTTGCAGGGCATAACGGGCAGCCAAGGGATTACTGGCCTTCAGGGCACGACTGGCTTGCAAGGTCTAACCGGCGCCCAAGGCGCAAACGGCACTCAAGGCGTTACTGGAATCCAAGGCCTTAGTGGCATACAAGGCACAGACGGAACACAAGGAATAGTCGGTGTTCAAGGTTTAACTGGGACACAGGGTTTAAGTGGCATACAAGGCGCGAACGGCACCCAAGGCACCACAGGCTCACAGGGTCTTACTGGAACGCAGGGCGCTCAAGGGACGCAGGGCGTTCTTGGTACGCAGGGAGCAGTAGGGGCACAAGGCACTCAAGGCGTTATCGGCTCACAGGGGCTTGATGGGACTCAAGGAACGCAGGGTGTTCTTGGAACGCAGGGCACTCAAGGCTTACTAGGCTTGCAGGGATTAACTGGCCTGCAGGGATTAACTGGCCTCCAAGGGCTAACTGGCTTGCAGGGAACAGACGGCCTAACTGGCTCTCAGGGTGTTCAAGGCATAACCGGCACTGGCATCCAAGGAACAACAGGCTTGCAAGGCACGCAAGGCATTTTGGGGACTGGAGTGCAAGGCACTGCTGGTGCGAATGGCAATGCCTACATTGTGGACTATCTGGATGGTGGCAGTGCATCAATCATCCCAGACATCGTTTACAACGCAGGGACTTCTACAACAAGCAGTTGGACATACACGATTGATGCTAGCGGCGCAACAGTTTCATTCTAA
Genbank protein accession
CAB5228553.1
[NCBI]
Genbank nucleotide accession
LR798392
[NCBI]
CDS location
range 4423 -> 5910
strand -
strand -
CDS
ATGAGCGCCAATAAAGTTACGATCAATCAAACCAACAACACGGTTGACATATCAAGCCCGGGCCCGCAAGGCGCAACCGGCGCACAAGGCATCCAAGGTGTGCAAGGCGCACAAGGCACCACAGGCGCACAAGGCACCACTGGAATCCAAGGTGCGACTGGATTGCAAGGCACGACCGGCGCCCAAGGCGTGCAAGGTGTGCAAGGCACGACTGGCATTCAGGGCGCACAGGGTGTGCAGGGTCGCCAAGGCACAACGGGCGCACAAGGCACAACGGGTACTCAAGGCACTCAAGGCTTGCAGGGGCGGCAAGGAACCACAGGCGCCACGGGCAGCCAAGGCACACAAGGCTTGCTTGGTTTGCAAGGGACTACCGGCGCACAAGGAACAATCGGAATCCAAGGCACAGACGGCACTCAAGGTTTAGTCGGAGCACAGGGAACACAAGGTATTCAAGGAATCCAAGGCTTGCTTGGCTTGCAAGGCACAACTGGAGCGCAAGGCACGCAAGGTGTGCAAGGCACTCAAGGTTTGTTGGGCGTTCAAGGCACGCAGGGCCTAGCGATTCAAGGCACAGCTGGAACTGGCGTCAATATTCTTGGTTCTTACCCTAGCTACGCCGCTTTGGTTTTAGCCCATCCAACCGGCAGCCCCGGCGATGCCTATTTAGTTAATGGCGATTTGTACGTTTGGGATGTGACCACTTCTGGTTGGATAAATGTTGGCAACATTCAAGGACCACAAGGCTTAACTGGGTTGCAGGGCATAACGGGCAGCCAAGGGATTACTGGCCTTCAGGGCACGACTGGCTTGCAAGGTCTAACCGGCGCCCAAGGCGCAAACGGCACTCAAGGCGTTACTGGAATCCAAGGCCTTAGTGGCATACAAGGCACAGACGGAACACAAGGAATAGTCGGTGTTCAAGGTTTAACTGGGACACAGGGTTTAAGTGGCATACAAGGCGCGAACGGCACCCAAGGCACCACAGGCTCACAGGGTCTTACTGGAACGCAGGGCGCTCAAGGGACGCAGGGCGTTCTTGGTACGCAGGGAGCAGTAGGGGCACAAGGCACTCAAGGCGTTATCGGCTCACAGGGGCTTGATGGGACTCAAGGAACGCAGGGTGTTCTTGGAACGCAGGGCACTCAAGGCTTACTAGGCTTGCAGGGATTAACTGGCCTGCAGGGATTAACTGGCCTCCAAGGGCTAACTGGCTTGCAGGGAACAGACGGCCTAACTGGCTCTCAGGGTGTTCAAGGCATAACCGGCACTGGCATCCAAGGAACAACAGGCTTGCAAGGCACGCAAGGCATTTTGGGGACTGGAGTGCAAGGCACTGCTGGTGCGAATGGCAATGCCTACATTGTGGACTATCTGGATGGTGGCAGTGCATCAATCATCCCAGACATCGTTTACAACGCAGGGACTTCTACAACAAGCAGTTGGACATACACGATTGATGCTAGCGGCGCAACAGTTTCATTCTAA
Gene Ontology
Description | Category | Evidence (source) | |
---|---|---|---|
GO:0005615 | extracellular space | Cellular Component | IEA:TreeGrafter (UniProt) |
GO:0030020 | extracellular matrix structural constituent conferring tensile strength | Molecular Function | IEA:TreeGrafter (UniProt) |
GO:0030198 | extracellular matrix organization | Biological Process | IEA:TreeGrafter (UniProt) |
Enzymatic activity
No enzymatic activity data available.
Tertiary structure
PDB ID: 170686
Method: ESMFold
Resolution: 0,5525
Evidence: 0,5257
Literature
No literature entries available.