Protein
View in Explore- UniProt accession
- A0A8S5MVN1 [UniProt]
- Protein name
- Baseplate wedge protein
- RBP type
-
TSP
- Protein sequence
-
MPQATRLGDNDTGHDACPPTALVSASGNVFINGKGAGRMGDSYAPHGCIDHPSHSGVLSSGSGTVLINGRKAGRIGDSVSCGGNAAEGSSNVIIGG
- Physico‐chemical
properties -
protein length: 96 AA molecular weight: 9347,16780 Da isoelectric point: 6,37093 aromaticity: 0,02083 hydropathy: -0,20000
Domains
Domains [InterPro]
cd14737
STR
2–95
STR
2–95
G3DSA:2.60.200.60
STR
2–95
STR
2–95
IPR008727
STR
50–96
STR
50–96
1
96
Architecture
STR 2-96
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
96
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 93 | 93 | 0,1733 |
| Central domain | 94 | 93 | 1 | 0,1165 |
| C-terminal | 94 | 96 | 2 | 0,7635 |
Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (2 AA) is still below minimum (10 AA). Sequence may be too short.
Sequence started with non-N-terminal domain|C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (2 AA) is still below minimum (10 AA). Sequence may be too short.
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-93
1-93
Central
94-93
94-93
C-terminal
94-96
94-96
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Caudovirales sp. ctUL28 [NCBI] |
2826778 | Uroviricota > Caudoviricetes > |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
DAD86200.1
[NCBI]
Genbank nucleotide accession
BK014996
[NCBI]
CDS location
range 25766 -> 26056
strand +
strand +
CDS
ATGCCGCAGGCAACAAGGTTGGGAGACAATGACACAGGACACGATGCCTGCCCGCCGACAGCGCTGGTATCGGCCAGCGGGAATGTCTTTATCAACGGGAAAGGAGCAGGCCGGATGGGTGACAGCTATGCGCCGCATGGCTGTATCGATCATCCTTCTCACAGCGGTGTGCTTTCATCTGGGAGCGGAACGGTCCTGATCAACGGACGCAAAGCAGGCCGGATCGGGGACAGTGTGAGCTGCGGAGGAAACGCTGCGGAAGGAAGCAGCAATGTAATTATAGGAGGTTAG
Genome Context
Genome Context
Tertiary structure
PDB ID
716aa66e8cd9c1e4afac64b322204dc54393cedb55f4615a50e9843a42b4f9c1
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50