Protein

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Genbank accession
URP85458.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLKAGTTVGGNTIWSQANLPLLPSGNTITYKGFKIYTENDKPTKAEIGLGNVTNDAQVKKAGDTMQGTLELQGSATELKLPFRIAMVRATEPYLVATRTDNNPVTNGFPSAETRTFVIHSKTTSPTSDPNAGANLVDLICTQRPAGGGAYYIRAFGAPNTTTGAAGAVRAELQMLGDNGLVSLTGTQFNIGMQTVVSGTIFGAQMAIKGDGNKNLYFQDAGGNELSLIYADTGKNLYVRTGGGAYATRFASDGTLVLANHLTVPGQATFNGLGVFNNRASVGVNYDSQGINSAILRVETNGDGNGVGDGVTHLGYKDGNGRYNHYFRGTGSTSINTKLGLNVNVPSYYNDVPQGTPAQYFLPTVGQGGKNYLRQFRGGNADTIWHETVQGGVWRLATGSTDAQEELQVSTAGYCRTRQEFQSTAVKGDGGQFRAVAGNYGFIIRNDGGTTYFLLTDSGNAYGSWNGLRPVMINNSTGMFTIGSGGTINGGGTINGGLDVNGSATFNNGLGCGTANGLGTTGISLGDNDTGFKQEGDGILNAYANSQRIMRWTTGATANYKQLQVQGVNGPALLLNNTATNQSCYLLITLAGNNGAYFGFGGADDNVSVHNYRLNTTLQLRTSDLYMNRGLYVEGNVNANDVYIRSDIRLKSNLVELKDSLSKIEQLKGYIYDKQSKDADDIVYHRESGLIAQDVEKVLPEAVREDTDTGMLTISPSGINALLVNAINELRERLEAIENKLGA
Physico‐chemical
properties
protein length:744 AA
molecular weight: 78895,64330 Da
isoelectric point:5,78811
aromaticity:0,08065
hydropathy:-0,32392

Domains

Domains [InterPro]
DC_1159
STR
1–351
DC_1159 IPR048390 G3DSA:6.20.80.10 IPR051577 Coil
DC_1202
STR
343–744
DC_1202
IPR030392
CHP
647–705
IPR030392
IPR030392
CHP
647–742
IPR030392
URP85458.1
1 744
Architecture
STR
ATT
STR
STR 1-426 | ATT 427-474 | STR 475-744
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URP85458.1
1 744
Domain Start End Length (AA) Confidence
N-terminal 1 457 457 0,1333
Central domain 458 656 200 0,2564
C-terminal 657 744 87 0,9974
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-457
Central
458-656
C-terminal
657-744

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage EC-W1
[NCBI] 		2662274 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URP85458.1 [NCBI]
Genbank nucleotide accession
MN508621 [NCBI]
CDS location
range 47869 -> 50103
strand +
CDS
ATGGCAGATTTAAAAGCGGGTACTACCGTTGGCGGTAATACTATCTGGAGTCAGGCGAACTTGCCTTTGCTCCCTTCTGGAAACACAATCACATATAAAGGCTTTAAAATCTACACCGAAAACGATAAGCCAACAAAGGCAGAAATCGGATTAGGCAACGTAACGAACGATGCACAGGTGAAGAAAGCTGGTGATACAATGCAAGGAACTTTGGAATTACAAGGTTCTGCAACTGAATTGAAATTACCATTCAGGATCGCAATGGTTAGGGCAACAGAACCGTATCTCGTTGCAACTCGCACAGACAATAACCCAGTAACAAACGGGTTTCCTAGCGCAGAAACACGCACATTTGTTATACATTCAAAAACAACTTCACCAACGTCAGATCCTAACGCTGGGGCAAACCTTGTTGATTTGATTTGTACTCAACGCCCTGCGGGTGGTGGTGCTTATTATATCCGTGCTTTTGGCGCACCAAACACGACAACTGGTGCTGCTGGGGCTGTCCGTGCTGAATTACAAATGTTGGGTGATAATGGTCTTGTTAGTTTAACGGGGACACAATTCAACATCGGGATGCAAACCGTTGTCAGTGGCACGATCTTTGGTGCGCAAATGGCTATCAAAGGCGACGGAAACAAAAACCTGTACTTCCAGGATGCTGGCGGTAATGAGCTTAGTTTGATCTATGCTGATACAGGAAAGAACTTATATGTTCGTACTGGTGGTGGTGCATATGCAACCAGATTTGCATCTGATGGAACTTTAGTTCTCGCTAACCATCTAACCGTTCCTGGTCAGGCTACATTTAATGGTCTGGGTGTGTTCAATAACCGTGCTTCTGTAGGCGTAAATTATGATTCACAAGGAATAAACTCAGCGATTCTTCGTGTTGAAACAAACGGTGATGGAAACGGGGTTGGTGATGGTGTTACCCACTTAGGCTATAAAGACGGCAACGGACGATATAACCATTATTTCCGTGGTACTGGTTCGACTTCTATCAACACCAAATTAGGTCTTAACGTAAACGTTCCATCATATTATAATGATGTTCCCCAGGGTACACCAGCGCAATATTTCTTGCCTACTGTTGGACAGGGCGGGAAAAACTATTTGCGTCAGTTCCGAGGCGGTAACGCGGACACAATCTGGCATGAAACTGTTCAGGGTGGTGTGTGGAGACTGGCAACAGGTTCTACCGACGCACAGGAAGAACTACAGGTTTCAACTGCTGGTTATTGTCGTACTCGTCAGGAATTCCAAAGCACAGCAGTAAAAGGCGACGGTGGACAATTCCGAGCGGTTGCTGGCAACTATGGTTTCATTATCCGTAATGATGGTGGCACTACCTATTTTCTGTTGACCGATTCTGGAAACGCATACGGTTCTTGGAATGGGTTGCGACCTGTTATGATCAACAACAGCACTGGTATGTTTACTATAGGTAGCGGTGGTACTATTAACGGCGGTGGTACTATTAACGGCGGTTTGGATGTTAACGGTTCTGCGACATTTAACAACGGTCTTGGTTGTGGTACTGCAAACGGATTGGGTACGACTGGTATTTCTCTGGGTGATAACGATACAGGTTTCAAACAGGAAGGTGACGGTATTCTCAACGCCTATGCAAATAGCCAGCGTATTATGCGATGGACTACTGGCGCAACTGCTAACTATAAACAGTTACAGGTTCAGGGTGTTAACGGACCAGCATTACTTCTGAATAACACAGCGACTAACCAATCGTGTTATTTGCTGATTACTTTGGCAGGTAACAACGGCGCATACTTCGGGTTTGGTGGTGCTGATGATAACGTATCGGTACACAACTACCGACTGAATACGACCTTACAGTTGCGTACTTCGGATCTGTATATGAACCGTGGTCTGTATGTTGAAGGTAACGTAAACGCCAACGATGTGTATATTCGTTCTGATATTCGACTGAAATCTAATTTGGTTGAATTGAAAGATTCATTAAGCAAGATTGAACAGCTTAAAGGTTATATCTACGATAAGCAATCAAAAGATGCTGATGATATCGTATATCATCGTGAATCCGGTCTGATCGCTCAGGATGTTGAGAAGGTATTGCCGGAAGCAGTGCGCGAAGATACTGATACTGGTATGCTAACCATTTCACCTTCGGGAATTAACGCGCTTCTGGTTAACGCAATCAACGAACTGCGTGAACGTCTGGAAGCAATCGAAAACAAATTAGGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d577fb4e8012bca039279dcd04e6b342b9f38d6649ef3a736e1f001433c6d4db
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6226
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Constructing and Characterizing Bacteriophage Libraries for Phage Therapy of Human Infections Gibson,S.B., Green,S.I., Liu,C.G., Salazar,K.C., Clark,J.R., Terwilliger,A.L., Kaplan,H.B., Maresso,A.W., Trautner,B.W. and Ramig,R.F. 2019 — GenBank