Protein

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Genbank accession
QDF45951.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYSNLSFVRHVGDGVKTLFPLTVAGENMGYFRVEDIHTYVDDKEVPNVIQSQSPHIVSITPAPPAGSDVLIRREMPIEKPYADFSRGNNFGHRQVNNSFLQQLYLTQELIDGFTPKGFYMKQNVDMGGHKHVNLGRGVDDKDSVNMAQYKEHDTRLVSLESSLPSAPSYVVNYRYIAKGGELQLETNRELSYAVLAINGVVQSIGSSFNILGSKIVLAEPLEDGDEVFAILSTPFSTKPVTFDGSTNWWYTASGGETSVNTNASFSSIILTINGIVQIPSKSYEVVGSIIHLAESLEEGDELYAMIVSG
Physico‐chemical
properties
protein length:310 AA
molecular weight: 34038,81190 Da
isoelectric point:4,94564
aromaticity:0,09355
hydropathy:-0,16161

Domains

Domains [InterPro]
IPR005604
ATT
1–113
IPR005604
DC_1609
STR
6–296
DC_1609
QDF45951.1
1 310
Architecture
ATT
STR
ATT 1-113 | STR 114-296 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaP_MGD2
[NCBI] 		2565877 Uroviricota > Caudoviricetes > Autographivirales > Colwellvirinae > Kaohsiungvirus
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDF45951.1 [NCBI]
Genbank nucleotide accession
MK820013.2 [NCBI]
CDS location
range 8068 -> 9000
strand -
CDS
ATGGCGTACAGTAACCTCTCGTTCGTTCGCCACGTAGGGGATGGAGTTAAGACTCTGTTCCCTTTAACAGTGGCTGGCGAGAATATGGGGTACTTTCGTGTAGAAGATATTCATACTTATGTAGATGATAAGGAAGTACCCAATGTAATACAATCACAATCACCTCACATCGTTAGCATTACACCAGCACCTCCTGCTGGCTCTGATGTTCTTATTCGTCGTGAGATGCCTATAGAAAAGCCTTACGCAGATTTCTCTCGTGGCAATAACTTTGGACATAGGCAAGTTAACAACTCCTTCTTACAGCAGCTCTACCTGACACAAGAGCTTATTGATGGGTTCACACCGAAAGGTTTCTACATGAAGCAAAATGTCGATATGGGTGGACATAAGCATGTGAACTTAGGTAGAGGTGTAGATGATAAAGACTCAGTTAATATGGCTCAATATAAAGAGCATGATACAAGACTTGTATCACTTGAATCTTCATTACCCTCTGCACCTTCCTATGTAGTTAACTATAGGTATATAGCTAAGGGTGGAGAGCTTCAGTTAGAGACTAATAGAGAACTATCATACGCGGTGCTAGCTATAAACGGTGTTGTACAGTCCATCGGCTCGTCGTTTAACATTCTTGGTTCTAAGATTGTACTAGCAGAACCTCTTGAAGATGGTGATGAGGTTTTCGCTATTTTATCAACACCCTTCAGTACTAAACCAGTCACATTTGATGGCTCTACTAATTGGTGGTATACAGCTAGTGGCGGTGAGACAAGCGTGAACACTAACGCATCGTTCTCTAGTATCATCTTGACAATTAATGGTATTGTTCAGATTCCATCAAAGTCTTACGAAGTTGTTGGCTCTATTATCCACCTAGCGGAGTCTCTCGAAGAAGGTGATGAACTCTATGCAATGATTGTTTCTGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
50b3c3a51aef9f8120678262cfc33dfd7eb13523d31a01b2344704704d840835
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8615
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50