Protein

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Genbank accession
WWO60261.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MANTDPAVRYATNTWEVDGTLDQFEISFAGGYIRQADVYAFSVVVDPETGLGHKRIDHPVTFLSESGLKATVKVASLPMEARRLVIYRASERAKLLVQFLNDSVLTKANLDLNSRQMLFNIQEIVDGLEASNILINEQVQQVIDINKLTQEIYNNVIQILEAGGIVSVNPRTWNGEWSVAEDTVGDSDFEMPGADVEGAGFYDTYINGVGMEPDVDYEVILDPDPTQPATIRFKKTDWPDGTKWFTVLRGYAKPYTGPPPVTTLAYPVIYADTAIHFVDKADAFAVVALTNAAAVTATVKLIPEAPGSKIETGTFVTLVQRGGQITVNADPGVTLWVPGGTTAKSRALNSAISLTCINADANIWLVSGDIAKE
Physico‐chemical
properties
protein length:373 AA
molecular weight: 40503,24960 Da
isoelectric point:4,54333
aromaticity:0,08579
hydropathy:-0,02091

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage SB3
[NCBI] 		3117472 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas euvesicatoria
[NCBI] 		456327 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWO60261.1 [NCBI]
Genbank nucleotide accession
PP079414.1 [NCBI]
CDS location
range 34936 -> 36057
strand +
CDS
ATGGCTAACACCGATCCGGCTGTCCGCTACGCCACTAACACGTGGGAAGTGGATGGCACGCTGGACCAGTTTGAGATCAGCTTTGCGGGTGGTTACATCCGGCAGGCTGACGTATACGCATTCTCTGTTGTCGTGGACCCGGAGACGGGCCTTGGGCATAAGCGCATCGACCACCCCGTTACCTTCCTGTCCGAGTCTGGATTGAAGGCTACGGTCAAGGTGGCTAGTCTTCCCATGGAAGCTCGCCGTCTGGTGATCTACCGTGCGTCCGAGCGGGCAAAGCTGCTGGTGCAGTTCCTCAACGACAGCGTGTTGACCAAGGCAAACCTTGACCTCAACTCGCGGCAGATGCTGTTCAATATTCAGGAGATCGTGGACGGGCTGGAAGCATCCAACATCCTGATTAACGAGCAGGTGCAGCAGGTCATCGACATCAACAAGCTGACGCAGGAGATTTACAACAACGTCATCCAGATTCTGGAGGCGGGTGGTATTGTCTCCGTCAATCCGCGCACGTGGAATGGCGAGTGGTCAGTTGCAGAAGACACCGTGGGCGACTCTGATTTCGAGATGCCCGGTGCTGACGTGGAAGGCGCAGGCTTCTACGACACGTACATCAATGGCGTTGGCATGGAGCCAGACGTGGACTACGAGGTCATCCTCGACCCCGACCCGACTCAGCCCGCTACCATTCGATTCAAGAAGACTGACTGGCCTGACGGCACCAAGTGGTTCACCGTCCTGCGAGGCTACGCGAAGCCGTACACCGGCCCACCGCCTGTCACGACTCTTGCCTACCCGGTGATCTACGCCGACACCGCCATCCACTTTGTGGACAAGGCCGACGCGTTCGCTGTGGTGGCCCTCACCAATGCGGCTGCTGTTACCGCTACGGTCAAGCTGATCCCCGAGGCTCCCGGTAGCAAGATCGAAACTGGAACCTTCGTCACTCTGGTGCAGCGTGGTGGACAGATCACCGTCAACGCAGATCCGGGTGTGACCCTGTGGGTTCCCGGCGGCACTACCGCTAAGTCCCGCGCCCTGAACTCCGCCATCTCGCTGACGTGCATCAACGCCGACGCGAACATCTGGCTGGTGTCCGGGGACATTGCCAAGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b9b22a56a1737f3367a017fb23e6bd3df413269563d3431ba00a03adb5a481ef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8167
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel lytic viruses for Xanthomonas sp. and Stenotrophomonas maltophilia Petrzik,K., Brazdova,S., Sovova,L. and Neoralova,M. 2023-07-17 — GenBank