Protein

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Genbank accession
YP_011109478.1 [GenBank]
Protein name
tail length tape-measure protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MKKILDSAREYLRTNNKIKTACLITLELPSSTGSSSAYIYLTDYFRDVIYNGILYTSGKVKSITTHKQNRKLSISSLSFTITGTAEDEVLKLVQNGVSFLDRSISIHQAVIDEEGNILTVDPDTNGPLLYFRGKITGGGIKDNIGTSGVSTSVITWNCSNQFYDFDRVNGRFTDDADHRGLEIVAGQLVPSNGAKRPEYQEDYGFFHANKSISILAKYQVQEERYKLQSKKKLFGLSRSYSLKKYYETVTKEVDLDFNLAAKFLPVVYGVQKIPGIPVFADTELHNPNIVYVVYAFCEGEIDGFLDFYFSDVPMICIDPNDSKSRTCFGTKKVAGDTMQRIASGQPSSEPSVHGQEYKYNDGNGDIRIWTYHGKADQSAADVLVNIAKEKGFYLQNMNENGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEVSAEVQGKKIKIYHSDGRVTADKTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTDAVGENRQIVQMNTILDTSESVFKNVQGLIESYGGAINNLSGQYRITVEKFSNTPLEIDFLDTYGDLELSDTTGRNKFNSVQASILDPALSWKTNSITFFNSIFKEQDKGLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLTFSLPYHFIGIEPNDPIAFTYGRYGWNKKYFLVDEVENSREGKINITLQEYGEDVFINSEQVDNSGNDIPDVSNNVLPPRDFMYTPTPGGQVGSIGKNGELSWLPSLTNNVVYYSIVHSGHADPYIVQQLETNPNLRMIQEIIGEPAGLAVFEIRAVDINGRRSSPVTLSVELNSAKNLSVVSNFRVTNTASGDASEFVGPDVKLAWDRIPEEDIIDGIFYTLEIYDNLDRLLRSVRIEDQYVYDYLLIYNKADYALHNEDALGINRKLRFRIRAEGDNGEQSVDWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107251,69730 Da
isoelectric point:5,05744
aromaticity:0,11275
hydropathy:-0,40285

Domains

Domains [InterPro]
DC_0187
STR
228–948
DC_0187
IPR032876
ATT
594–696
IPR032876
YP_011109478.1
1 949
Architecture
STR
ATT
STR
STR 228-593 | ATT 594-696 | STR 697-948 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_011109478.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9431
Central domain 313 525 214 0,3153
C-terminal 526 949 423 0,0049
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-525
C-terminal
526-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage bux
[NCBI] 		2713288 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus bux
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011109478.1 [NCBI]
Genbank nucleotide accession
NC_092684 [NCBI]
CDS location
range 28795 -> 31644
strand +
CDS
ATGAAGAAAATTCTTGACAGTGCAAGAGAGTATTTAAGAACCAATAATAAAATAAAAACTGCATGCCTTATTACTCTTGAATTGCCAAGCTCTACCGGATCAAGTTCTGCGTACATTTATCTTACAGACTATTTTAGGGATGTAATTTATAATGGTATTCTTTACACATCTGGTAAAGTTAAGTCTATAACAACACATAAACAAAATAGAAAACTTTCCATTAGTAGCCTTTCTTTTACTATCACAGGTACTGCTGAAGATGAAGTATTAAAACTAGTCCAAAATGGTGTATCCTTCCTAGATAGATCCATCTCAATCCATCAAGCGGTTATTGATGAAGAAGGTAACATTCTTACTGTAGATCCAGACACTAATGGTCCTTTACTTTACTTCCGTGGTAAAATCACTGGTGGTGGTATTAAGGATAACATTGGTACTTCTGGAGTTAGTACATCTGTTATTACATGGAACTGTTCAAACCAATTCTATGACTTTGATAGAGTAAACGGACGTTTCACAGATGATGCTGACCATAGGGGACTTGAGATTGTTGCTGGCCAATTAGTTCCATCTAATGGTGCTAAACGACCTGAATATCAAGAGGACTACGGATTCTTCCACGCTAACAAGAGTATTTCTATTCTTGCTAAGTATCAGGTTCAGGAAGAACGTTATAAGTTACAATCTAAGAAAAAGTTATTTGGTCTTTCTAGAAGCTATAGCCTAAAGAAATACTATGAGACTGTAACTAAGGAAGTCGATCTTGATTTTAACTTAGCAGCTAAATTCCTTCCAGTAGTATACGGAGTTCAGAAAATTCCTGGAATCCCAGTATTTGCAGATACTGAACTGCATAACCCTAATATCGTATATGTAGTATACGCTTTCTGTGAGGGTGAGATTGATGGATTTCTAGATTTCTACTTTAGTGATGTACCAATGATCTGTATTGATCCTAATGATAGTAAGTCTCGTACTTGTTTTGGTACTAAGAAAGTAGCTGGTGATACCATGCAACGTATTGCTTCTGGTCAACCAAGCTCTGAACCTTCTGTTCATGGACAGGAATATAAGTATAATGATGGTAATGGCGATATCCGTATCTGGACTTATCATGGTAAGGCTGATCAATCTGCTGCTGATGTTCTAGTTAACATTGCAAAAGAGAAAGGTTTCTATCTACAGAACATGAATGAGAATGGACCGGAATACTGGGACTCTCGTTATAAACTGTTAGATACTGCTTATGCTATCGTTCGCTTTACTATTAATGAAAACAGAACAGAAATTCCAGAAGTTAGTGCTGAAGTTCAAGGTAAGAAGATTAAGATCTATCATTCAGATGGTAGAGTAACTGCTGATAAGACCAGCTTAAATGGTATATGGCAAACTCTGGACTACCTAACCTCTGATCGCTACGGTGCTAATATCACTATCGATCAGTTCCCACTCCAGCAACTTATTCAAGAAGCAGCTATTTTGGATATCATTGATGAATCCTACCAGGTTTCTTGGCAACCCTATTGGAGATACGTTGGATGGACTGATGCTGTAGGAGAGAATAGACAAATAGTTCAAATGAACACTATTCTCGATACCTCTGAGTCCGTATTTAAAAACGTGCAGGGATTAATAGAGTCTTATGGTGGTGCTATCAACAACTTATCTGGTCAATATAGAATAACTGTTGAGAAGTTCTCAAACACCCCATTAGAGATTGACTTCTTAGATACCTACGGTGATTTGGAGCTATCAGATACCACAGGTAGAAATAAGTTCAACTCAGTACAAGCCTCCATATTAGATCCTGCATTAAGCTGGAAGACTAACTCCATTACATTCTTTAACTCTATATTTAAGGAACAAGATAAAGGATTAGATAAAAAACTTCAGCTTTCTTTTGCAAATATCACTAACTACTATACTGCACGTAGCTTTGCAGATAGAGAACTGAAAAAGTCTCGTTACTCACGAACTCTCACATTCTCATTACCATATCATTTCATAGGCATTGAGCCTAACGATCCGATTGCTTTTACATATGGTCGTTATGGTTGGAATAAGAAATACTTCCTAGTTGATGAGGTTGAAAACTCTAGAGAAGGTAAGATTAATATTACACTGCAAGAGTATGGTGAGGATGTATTTATTAACTCCGAGCAGGTTGATAATAGTGGTAACGATATCCCTGATGTTAGTAATAATGTACTGCCTCCTAGAGACTTTATGTATACACCAACACCGGGTGGACAAGTAGGATCTATTGGTAAGAATGGTGAGTTATCTTGGCTTCCTAGCTTAACTAATAACGTTGTTTACTACTCCATTGTTCATTCTGGACATGCTGATCCTTACATCGTACAGCAATTAGAAACTAATCCAAATCTACGAATGATCCAAGAAATTATTGGAGAACCTGCTGGTTTAGCAGTCTTTGAGATTAGAGCTGTAGATATTAATGGTAGACGAAGTTCTCCTGTAACACTATCGGTAGAACTTAACTCTGCTAAAAACTTAAGCGTCGTTAGTAATTTCAGGGTTACTAATACAGCTTCAGGAGATGCATCGGAGTTTGTAGGACCAGACGTTAAGTTGGCCTGGGATAGAATTCCAGAAGAAGATATCATTGATGGAATCTTCTACACTCTCGAAATCTACGATAACCTAGATCGTTTATTAAGAAGTGTACGAATTGAAGATCAGTATGTCTACGATTATCTACTGATATACAATAAGGCAGACTATGCTCTTCATAACGAGGATGCTCTAGGTATTAATAGGAAGTTACGCTTCCGTATAAGAGCAGAAGGTGATAATGGCGAGCAATCTGTGGATTGGGCATCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a9fd9145fc17f730e6765b9b2af608ad70aed9c05c8876ea36e7f9a679e09d95
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8194
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank