Protein

View in Explore
Genbank accession
QBQ80536.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGAGILIDYNDGRPIMEITAGLRAPSYCTTFDQRCQSDKTLTINTPLTPGSDLVVALTRPVEVLEVFDQTLVLPDPFYVTSVQRNGDSGIILRGADAHNAYSGLPQWAGIIMEVLPVGSRNAGLLVANSTDFTAISNVSRLMTCRYAQRVHVNGSMPLPVGGIPFARWDNGNVSVGFDGSSIIVRNSSYGGIDDVGAEVDLDLVIFNNTPPSPGTGITMTNNQGQVTFSTVNKPFVLNSVINIGTGGQNIGNSLVQLSYTGALIENNSGYNHVRMNGIRMAGNVVSAARNRVIGNYSRQQFQMPNRNIAVPTPLLVIPNMY
Physico‐chemical
properties
protein length:321 AA
molecular weight: 34392,61370 Da
isoelectric point:5,89781
aromaticity:0,06854
hydropathy:0,00561

Domains

Domains [InterPro]
IPR045604
STR
4–297
IPR045604
QBQ80536.1
1 321
Architecture
STR
STR 4-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ80536.1
1 321
Domain Start End Length (AA) Confidence
N-terminal 1 87 87 0,0805
Central domain 88 286 200 0,0147
C-terminal 287 321 34 0,9962
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-87
Central
88-286
C-terminal
287-321

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_WF5505
[NCBI] 		2508186 Uroviricota > Caudoviricetes > Dhillonvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ80536.1 [NCBI]
Genbank nucleotide accession
MK373790 [NCBI]
CDS location
range 26593 -> 27558
strand -
CDS
ATGGGCGCTGGAATACTCATCGACTACAACGACGGACGACCGATTATGGAGATAACTGCCGGTTTGCGCGCTCCGTCATACTGCACTACGTTTGATCAGCGCTGCCAGTCCGACAAGACGCTGACCATTAATACCCCGCTAACACCAGGGTCGGACCTTGTCGTTGCACTCACGCGCCCGGTAGAAGTGCTTGAGGTGTTCGACCAGACGCTGGTTCTCCCCGACCCGTTCTACGTGACGTCGGTACAGCGCAACGGGGATAGTGGAATTATCCTTCGAGGCGCGGACGCGCATAACGCATACAGCGGCCTCCCGCAATGGGCTGGTATAATTATGGAAGTGCTGCCGGTGGGGTCACGCAATGCGGGCTTACTGGTGGCGAACTCGACAGACTTCACCGCGATTTCCAACGTGTCCCGGTTAATGACCTGCCGCTACGCGCAGCGCGTGCACGTGAACGGTAGTATGCCTTTGCCTGTGGGCGGTATCCCGTTCGCGCGCTGGGATAATGGCAACGTATCGGTAGGCTTCGATGGTAGTAGTATCATCGTCCGCAATTCGTCTTATGGCGGGATTGATGACGTCGGGGCCGAAGTGGACTTGGATCTGGTTATCTTCAACAATACGCCTCCATCACCGGGGACTGGTATCACCATGACGAACAACCAGGGGCAGGTCACGTTCTCGACCGTTAACAAGCCGTTTGTGCTCAATTCGGTAATTAATATCGGCACCGGCGGTCAGAATATCGGTAATAGCCTCGTACAGCTTTCATATACCGGCGCGCTCATTGAGAACAACAGCGGCTACAACCACGTTCGAATGAACGGGATACGCATGGCGGGCAACGTGGTTAGTGCGGCGCGTAATCGCGTAATCGGTAACTACTCACGGCAGCAATTCCAGATGCCTAACCGCAACATAGCCGTCCCAACCCCGTTACTCGTCATACCTAACATGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6a0f0de8cbac4315ee77cb135560a14cf93a12f1765f803d30a4cc709052349e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8127
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank