Protein

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Genbank accession
AOO18528.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTIRVDELRALSDNDFSINVSPNDNFEIQGTIEFDSGASFSVPVGTTAQRPTSPVGGMLRYNSTLERLEFYDGTVWQNFIGSSAAPNGATEATAVTSVQALYDAGQVTDGSYWINFDGTARQYFVPLNSHPYYILMGNWGGGADKFLQNASALSGNQLNSNGDNTPTGNWANNGTYGYYRNAGGSDFKYATMDARGIQYRYVKMKFNLYNYYSNDGVTARNFLGISSNVGDGVTIMRDDSAVGDAQHIFTYYSAISNNDSNGCPSATPTFPSHVRVGTNPGAFMGSRFCCFSREGSSYTTEYVRNFTPYAGDSGGGTVPNAFTGDAWYEMDLSINYPHNLHCVIHSDQDSGNEDTYIKRGVVLVRPA
Physico‐chemical
properties
protein length:368 AA
molecular weight: 40078,23930 Da
isoelectric point:4,76563
aromaticity:0,13043
hydropathy:-0,44266

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOO18528.1
1 368
Domain Start End Length (AA) Confidence
N-terminal 1 79 79 0,4487
Central domain 80 278 200 0,0132
C-terminal 279 368 89 0,9955
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-79
Central
80-278
C-terminal
279-368

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM12 isolate W1_08_0910
[NCBI] 		2790660 Uroviricota > Caudoviricetes > Pantevenvirales > Brizovirus > Synechococcus virus SRIM12-08
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO18528.1 [NCBI]
Genbank nucleotide accession
KX349323 [NCBI]
CDS location
range 28974 -> 30080
strand +
CDS
ATGAGCACTATTAGAGTAGACGAACTTAGAGCATTATCAGATAATGATTTTTCTATTAATGTAAGTCCCAATGATAACTTTGAAATTCAAGGAACTATTGAGTTTGACTCTGGTGCATCTTTTTCTGTACCTGTAGGAACAACTGCCCAAAGACCTACTTCACCTGTAGGGGGTATGTTGAGGTATAATTCTACACTCGAACGTCTTGAGTTTTATGATGGAACTGTTTGGCAAAACTTCATTGGTTCTAGTGCTGCACCAAATGGAGCAACAGAAGCAACCGCAGTTACTTCAGTGCAAGCATTATATGACGCTGGACAAGTAACAGATGGATCATATTGGATTAACTTTGATGGTACTGCTAGGCAATATTTTGTACCATTGAATAGTCATCCATATTATATTCTGATGGGTAACTGGGGTGGTGGTGCTGATAAGTTTTTGCAAAATGCTAGTGCATTAAGTGGCAATCAACTTAATAGTAATGGTGATAACACTCCTACGGGAAACTGGGCAAATAATGGTACTTATGGATATTATAGAAATGCGGGTGGAAGTGACTTTAAGTACGCTACAATGGATGCTAGGGGTATACAATATCGTTATGTGAAGATGAAATTCAATCTTTATAACTATTATTCTAATGATGGTGTTACTGCTAGAAACTTTTTAGGCATTAGTTCTAATGTTGGCGATGGCGTGACCATTATGAGAGATGATAGTGCTGTAGGTGATGCTCAGCATATTTTTACATATTATAGTGCTATCTCTAATAATGATAGCAATGGTTGTCCTTCTGCAACTCCAACATTTCCCTCACATGTACGGGTAGGAACTAATCCTGGTGCATTTATGGGTAGTAGATTCTGCTGTTTTTCTAGGGAAGGTAGCAGTTATACTACAGAATATGTTAGAAACTTTACTCCATACGCTGGAGATAGTGGTGGTGGCACTGTACCTAACGCCTTTACTGGTGATGCTTGGTATGAAATGGACTTGAGTATAAACTATCCTCATAATTTACATTGTGTCATTCATTCCGATCAAGATTCTGGTAATGAGGACACCTATATAAAACGAGGAGTTGTACTCGTTCGTCCTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
29ea1d7f949e4ec4864a434d958f5568585efac7e0a07654a38540a1352b6f1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4181
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50