Protein
View in Explore- Genbank accession
- CAH1069843.1 [GenBank]
- Protein name
- phenylacetic acid degradation protein
- RBP type
-
TSP
- Protein sequence
-
MPCYSIDGVIPVVSPEAFVHPTAVLIGDVIIEAGVYVGPFASLRADFGRIHIKQNANIQDSCTVHGFPQSVTLVEEMGHIGHGTTLHGCRIGKNVLVGMNSVILDYAEIGENTIIGANSLVKTKDVIPANVLAMGSPAKVARDLSEQEKKWKTRGTQEYMELAQRCLNSMQEVQPLTSELDDRLTYKDFSSSNYQIKQDSV
- Physico‐chemical
properties -
protein length: 201 AA molecular weight: 21946,80520 Da isoelectric point: 5,47248 aromaticity: 0,05970 hydropathy: -0,08905
Domains
Domains [InterPro]
IPR011004
STR
2–171
STR
2–171
G3DSA:2.160.10.10
STR
3–175
STR
3–175
IPR050484
Unmapped
5–172
Unmapped
5–172
cd04745
STR
11–165
STR
11–165
cd04745
STR
11–175
STR
11–175
IPR001451
STR
88–122
STR
88–122
1
201
Architecture
STR 2-175 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
201
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 28 | 28 | 0,0008 |
| Central domain | 29 | 190 | 163 | 0,3348 |
| C-terminal | 191 | 201 | 10 | 0,9966 |
Note: Constraints were applied during segmentation.
Fixed 39 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 39 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-28
1-28
Central
29-190
29-190
C-terminal
191-201
191-201
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage MD-2021a [NCBI] |
2899278 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAH1069843.1
[NCBI]
Genbank nucleotide accession
CAKLQH020000001
[NCBI]
CDS location
range 164243 -> 164848
strand +
strand +
CDS
ATGCCTTGTTATAGTATTGACGGTGTTATTCCAGTCGTTAGCCCAGAGGCTTTTGTACACCCAACCGCTGTTTTAATTGGTGATGTGATTATTGAAGCGGGTGTATATGTAGGACCATTTGCTTCATTGCGTGCCGATTTTGGACGTATTCATATTAAGCAAAATGCCAATATACAAGATAGCTGCACCGTACATGGTTTTCCGCAAAGCGTGACTTTAGTTGAAGAAATGGGGCACATTGGGCATGGCACAACTTTACATGGTTGCCGCATTGGTAAAAATGTTTTGGTTGGCATGAACAGCGTAATTTTGGACTATGCCGAAATTGGTGAAAACACCATTATTGGTGCAAATAGTCTGGTCAAAACCAAAGATGTTATTCCGGCAAATGTATTGGCAATGGGTAGTCCTGCCAAGGTTGCACGTGATTTATCAGAACAAGAAAAAAAATGGAAAACCCGCGGTACGCAAGAATACATGGAGCTTGCACAGCGCTGCTTAAACTCAATGCAAGAAGTTCAGCCTCTAACTTCAGAGTTGGATGACCGCCTAACCTATAAGGACTTTAGTTCTTCAAACTATCAGATTAAACAAGATAGCGTTTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
4e4cf4f113211d76e965d05842e84c762bbbbd257690680fccd33ba82288cbe0
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50