Protein

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Genbank accession
AHN84789.1 [GenBank]
Protein name
DUF2479 domain-containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MADAVKEYDIILDVTRPYENQRVIGRLADRDLTSILVKLTKTGLPINLTGYSIYFECRLPYQDGEQINYVRDDGSVYQNLEIVDASQGIFRYTFIKEVWSKVGYMPEAYFALEQLVGTVNKRVTTQNFSLTIQNNATNNSMQTPPFTSDIEAFKDAIRAELADVQTELDNTSDDVTALTGNVATLDTEVKALQASIDANQVVLKTDITNYQPYAFTDANGTRIDLGTLTALSPGLPTLDAKLYEGVSPASLADKATIGFPPQITTTTAVSFQLDVTTGKSGTKILVLRTVPDSVTYEMHVDKSGVTLPWFTYASKEQMDTADANVQSAASTDATTKANTAQQNAITTATANAKTYTDNVVWSSRVLKANTNVYPNASQTVTFGKNITNMRNGIILVWRWDSSNINYTYTYVPKRHVEAREGVTVGSVIAYSNDTVKDYAGNRTIVKMVRLYNDRLVGHDNNANTTNWSNRVRLEEVLEY
Physico‐chemical
properties
protein length:479 AA
molecular weight: 53034,63640 Da
isoelectric point:4,97292
aromaticity:0,08768
hydropathy:-0,31357

Domains

Domains [InterPro]
DC_1249
STR
1–472
DC_1249
G3DSA:2.60.40.3350
ATT
5–138
G3DSA:2.60.40.3350 Coil
IPR018913
ATT
6–157
IPR018913
SSF58100
Unmapped
105–225
SSF58100
AHN84789.1
1 479
Architecture
ATT
STR
ATT 1-157 | STR 158-472 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LP-026
[NCBI] 		1173745 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales
Host Listeria monocytogenes FSL J1-208
[NCBI] 		393119 Bacteria > Firmicutes > Bacilli > Bacillales > Listeriaceae > Listeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHN84789.1 [NCBI]
Genbank nucleotide accession
KJ094020 [NCBI]
CDS location
range 46465 -> 47904
strand +
CDS
ATGGCTGATGCAGTAAAAGAATATGACATTATACTAGACGTAACAAGACCTTATGAAAACCAAAGAGTTATAGGTCGCCTTGCCGACAGAGATTTAACGTCTATTCTAGTTAAGCTAACCAAGACTGGACTGCCTATCAATTTAACTGGCTATTCAATCTATTTTGAATGTCGTCTTCCTTATCAAGACGGCGAACAAATTAACTATGTACGTGATGACGGTTCTGTTTATCAGAACTTAGAAATAGTAGATGCTTCACAGGGAATATTCCGCTACACATTTATTAAAGAAGTGTGGTCAAAAGTTGGATACATGCCAGAGGCATACTTTGCATTAGAGCAACTTGTTGGAACAGTTAACAAACGTGTTACTACCCAGAACTTCTCTCTAACTATTCAAAATAATGCAACAAATAATTCCATGCAAACACCGCCATTTACATCAGATATTGAAGCTTTCAAAGATGCTATTAGAGCAGAGCTTGCAGATGTACAAACAGAACTAGATAATACTTCTGATGATGTAACAGCATTGACTGGAAATGTAGCAACACTTGATACAGAAGTAAAGGCACTACAAGCTTCTATTGATGCCAATCAAGTAGTTCTTAAAACAGATATTACAAACTATCAACCGTACGCTTTCACAGATGCTAACGGAACTAGAATTGATTTAGGAACATTGACAGCACTATCGCCCGGACTACCTACATTAGATGCGAAGCTATACGAAGGTGTTTCTCCCGCTTCATTGGCTGACAAAGCAACTATAGGTTTCCCACCACAGATAACAACCACAACCGCTGTAAGCTTTCAATTAGATGTTACAACAGGAAAATCTGGAACAAAGATTTTAGTATTAAGAACTGTACCAGATAGTGTGACGTATGAGATGCACGTTGACAAGTCCGGCGTAACCCTTCCTTGGTTCACTTATGCTTCTAAGGAGCAAATGGACACAGCAGATGCAAACGTTCAATCAGCTGCCTCTACGGACGCTACAACGAAGGCTAACACTGCTCAACAAAATGCCATCACAACAGCTACAGCAAATGCGAAAACATACACAGATAATGTTGTATGGTCTTCACGTGTTCTTAAAGCCAACACTAACGTATATCCAAACGCAAGTCAAACAGTTACCTTTGGTAAGAATATCACAAATATGCGTAATGGAATTATCCTTGTTTGGAGGTGGGATTCTTCTAACATAAACTACACCTACACTTACGTACCTAAACGACATGTAGAAGCTCGTGAAGGAGTTACTGTAGGTTCAGTTATAGCATATTCAAACGATACTGTAAAGGATTATGCTGGTAACCGTACAATAGTGAAGATGGTAAGACTATACAATGACCGATTAGTAGGTCACGATAACAATGCCAATACTACAAACTGGTCAAATAGAGTACGGCTAGAGGAAGTATTAGAGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2c4d6dcc41e2c04809876254d11e87f3c165af77f6eda59a37cd2e8f5fcebf3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8329
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50