Protein

View in Explore
Genbank accession
YP_011898420.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MDNIRIAILSANNTPVAFMDNQHKKSMHYWKDELHEYLQGAANTYTFTVSAKHQDAENVTAGNKVAFIHKGKSYYLNIVNTEQTEETITATAWSLSFELINEDAGEYKAGKAMSFEEYLAIFDAERTLKLGLNEVSDKRITNEWTGTTSVLKRLFSLANVFSAEIEFETVLNSDYSLKEIVLNVYRKHSDTDSGVGEYRNDIVLRYGKGITGIRKTTDAEKLYTCIQPTGKDGLTINGLDKKEYDENGNIEYFTDGAIIRAPQARDRFPSNIVNKEDAYILMRKEYDTDSKDKLYSMALSDLKTASEPVVTYEVDGYFDTNIGDTVRMQDQEWTPVLYLQARVSEQIRSLTNPKTAKTVFTNYKELTSEISDSLLQRMQDLINKNKVYTCSISTNNGIIFKNGIGSTTLTAYAYDNGVDVADKLQFRWSKDGTEFYVGKSVTVNAEDVDVKAVYSFTAFESGVKRGYYEVTITDVMDGEDGQDGTTYYTWFKFADDEYGNGMSSSPDGKEYLGIAYNKVTPVMSNNPEDYQWARITGEGVPGKPGDDGKTYYTWVRYADDASGNGMSDSPNGKYYIGFAYNKEVPTESSNPTDYQWSKYKGDDGQDGVGIKSITKYYLASEKSTGITISSSGWSTTKQDMTDVKKYLWSYEVYAYTNGTSTKTTPIIIGVHGQNGGDGDSGIIVSPTAPENPKAGQLWQTASGEPIKRWDGSKWVIYYISVENLNVETLSAIAADLGTVTAGLIKDKNGTMLIDVTSGKIISKKIVQGAVENVASLSNAYLDFSGKAPTTDRATMSVNLQNIMFTNENTRKATTIQFEDEMIYARNSVSPRISIYAYRNYDSGTVKGPYTSTNSANNIRVELKRRGFMVTCKITMLAQFPSSGGFGAFDEVGIPVGYRPVFDIYAPYSEVSGSSIFGTGRYIIGKDGGITIYVNNPNWTERLATLTWITDNN
Physico‐chemical
properties
protein length:952 AA
molecular weight: 105942,61700 Da
isoelectric point:5,01157
aromaticity:0,11239
hydropathy:-0,49538

Domains

Domains [InterPro]
IPR010572
ENZ
138–365
IPR010572
YP_011898420.1
1 952
Architecture
ENZ
ENZ 138-365 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_011898420.1
1 952
Domain Start End Length (AA) Confidence
N-terminal 1 777 777 0,9364
Central domain 778 941 165 0,2093
C-terminal 942 952 10 0,9974
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-777
Central
778-941
C-terminal
942-952

Taxonomy

  Name Taxonomy ID Lineage
Phage Ruminococcus phage phiRg519T2
[NCBI] 		2772519 Uroviricota > Caudoviricetes > Munstervirinae > Adovirus 519T2 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011898420.1 [NCBI]
Genbank nucleotide accession
NC_104264.1 [NCBI]
CDS location
range 13411 -> 16269
strand +
CDS
GTGGATAACATCAGGATCGCGATTTTAAGCGCGAATAACACACCAGTAGCGTTTATGGACAATCAGCACAAGAAGTCCATGCACTACTGGAAAGACGAATTGCACGAATACTTACAGGGTGCGGCAAATACTTACACCTTTACGGTGTCCGCAAAGCATCAGGATGCAGAGAATGTTACCGCCGGGAATAAGGTGGCGTTTATACACAAAGGGAAATCCTACTATCTAAACATCGTAAACACTGAGCAGACAGAGGAGACGATCACAGCTACGGCGTGGTCGTTATCTTTTGAGCTAATCAACGAGGATGCCGGAGAGTACAAAGCCGGAAAAGCAATGAGCTTTGAGGAGTACCTTGCCATATTTGACGCGGAAAGAACACTGAAATTGGGTCTCAACGAGGTGTCAGATAAGCGAATCACCAACGAATGGACCGGTACAACGTCCGTATTAAAGAGATTATTCTCCCTGGCTAATGTCTTTTCTGCGGAGATCGAATTTGAGACAGTCTTAAACAGCGATTACTCCTTAAAAGAGATTGTCCTAAATGTATATCGGAAACACTCCGATACAGACAGCGGAGTCGGAGAATACCGGAATGACATTGTACTGCGGTACGGGAAAGGAATTACCGGAATTCGAAAAACCACAGATGCCGAGAAGCTTTACACCTGTATCCAGCCGACTGGGAAAGACGGGCTGACAATCAATGGACTGGACAAAAAAGAATACGATGAGAACGGGAATATCGAGTACTTTACAGACGGCGCAATCATCCGGGCACCACAGGCAAGAGACCGGTTTCCGTCCAATATCGTGAATAAAGAGGATGCTTATATCCTGATGCGTAAAGAGTACGATACAGACAGCAAGGACAAGCTCTATAGCATGGCTCTGTCTGATCTTAAAACAGCATCTGAACCGGTGGTGACTTACGAGGTGGACGGATATTTTGACACCAACATCGGGGACACCGTGAGGATGCAGGATCAGGAGTGGACACCAGTCCTTTATCTACAGGCAAGAGTATCAGAACAGATCAGGAGTCTTACCAATCCAAAAACTGCAAAGACGGTATTTACAAACTACAAAGAGCTGACATCGGAAATTTCGGACAGCTTATTACAGAGGATGCAAGACCTTATTAATAAAAATAAGGTTTATACTTGCTCTATCTCAACAAACAACGGCATTATCTTTAAAAATGGCATCGGTAGCACTACTCTGACAGCTTACGCTTACGATAACGGCGTGGATGTGGCAGACAAGCTACAATTCCGATGGAGCAAAGATGGTACAGAGTTTTATGTCGGTAAGAGCGTTACGGTTAATGCAGAGGATGTGGATGTAAAAGCAGTGTACTCTTTTACGGCGTTCGAAAGCGGAGTAAAGCGTGGATATTACGAGGTTACGATTACGGATGTAATGGACGGAGAGGATGGTCAGGACGGAACAACTTATTACACATGGTTTAAATTTGCTGATGACGAGTATGGAAACGGGATGTCCAGCAGTCCAGATGGAAAGGAATACTTAGGAATTGCCTACAATAAGGTGACTCCAGTAATGTCCAATAATCCGGAAGATTACCAGTGGGCAAGGATCACCGGAGAGGGAGTACCAGGAAAGCCCGGAGATGACGGAAAAACTTACTATACGTGGGTGAGATATGCGGATGATGCCAGCGGAAACGGGATGTCTGACAGCCCGAACGGAAAATATTACATCGGATTTGCCTATAACAAGGAAGTACCGACAGAAAGTAGCAATCCCACAGATTATCAGTGGTCGAAGTATAAAGGGGATGATGGTCAGGACGGTGTTGGAATCAAATCTATTACAAAGTACTACCTCGCATCCGAAAAGAGTACCGGAATCACAATATCCTCTTCTGGGTGGAGCACTACGAAGCAGGACATGACGGACGTAAAAAAATATTTGTGGAGCTACGAAGTTTATGCCTACACAAATGGAACCTCGACCAAGACAACCCCTATTATCATCGGAGTACACGGGCAGAATGGGGGAGACGGGGATTCCGGCATTATCGTGTCTCCAACAGCTCCGGAAAATCCAAAAGCGGGACAGCTCTGGCAGACTGCAAGCGGAGAGCCGATTAAAAGATGGGACGGCAGTAAGTGGGTGATCTATTACATTTCGGTAGAAAATCTGAATGTAGAGACGCTAAGTGCGATTGCGGCAGATCTTGGAACTGTAACTGCCGGACTTATTAAGGATAAGAATGGAACAATGCTTATCGATGTTACATCCGGAAAGATTATTAGCAAGAAAATCGTGCAAGGAGCAGTGGAAAATGTTGCGTCATTGAGTAATGCGTATTTGGACTTCTCCGGTAAGGCTCCGACAACAGATCGAGCTACTATGAGCGTGAACTTGCAAAACATCATGTTTACAAATGAAAATACAAGAAAAGCAACGACAATCCAGTTTGAGGATGAAATGATATATGCAAGAAATTCTGTATCCCCACGTATAAGCATATATGCGTATCGCAATTACGATTCCGGTACCGTGAAAGGTCCATATACAAGTACAAACTCCGCTAATAACATTCGCGTGGAGCTGAAAAGAAGAGGATTTATGGTAACATGCAAGATCACAATGCTTGCACAGTTTCCGAGCAGCGGAGGATTTGGGGCATTCGATGAAGTCGGAATTCCGGTTGGGTATCGCCCGGTGTTTGACATTTACGCACCTTACAGTGAGGTGTCCGGCTCCTCGATCTTTGGGACCGGTCGATATATAATTGGAAAAGACGGTGGAATTACAATCTATGTCAATAATCCAAATTGGACAGAGCGTCTCGCAACACTTACATGGATCACGGATAACAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
07409bdb323f9434dc74c85c1ee58af9683771976cf50945a3bd3bd8d1e0dc20
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8175
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Temperate bacteriophages infecting mucin-degrading bacterium Ruminococcus gnavus from the human gut Khokhlova,E.V., Shkoporov,A.N., Draper,L.A., Kingston,A.R., Forde,A., Ross,R.P. and Hill,C. 2023-03-30 — GenBank