Protein

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Genbank accession
WNA16191.1 [GenBank]
Protein name
GTPase regulator
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MFPIPVISQYGNKAPKMKIQKMVASQTHRALLYENGELYTAGAGTSYKTGTGTTSTDYLNWSKVLTDVKDVFVSATWTLAVKRDNTFWHCGVKTGIYGTSGNNTVFTDCTSIINSVGTYDQIRKIRGGSNNSTVILLKSGDLYGIGTNLNYELGLGHNSTVTSWTLTNTSCSEVELLSVNTWVIKNGQYWRVGNNANGQLSNNGLTTYQTWTAFANPTGYEPFQVQPTVGEAFLLMKSTTDGTTRIYGAGYNYAGDLTLTSKNVSNMTALTAYDGLVQDIKNSGSSTHIMTLTCTDGLRSSGYNVKGQLGINNTTDQNVYGFMPCVGLSTDPVQFVCTQYYTSNYVVQNDKVYWAGDVTYNSSTGTDSYIFIPLKTPYNYNSE
Physico‐chemical
properties
protein length:383 AA
molecular weight: 41887,16690 Da
isoelectric point:6,87964
aromaticity:0,11488
hydropathy:-0,30966

Domains

Domains [InterPro]
IPR009091
STR
7–180
IPR009091 IPR009091
IPR009091
STR
8–322
IPR009091
IPR051553
Unmapped
16–211
IPR051553
IPR009091
STR
20–315
IPR009091
WNA16191.1
1 383
Architecture
STR
STR 7-378 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNA16191.1
1 383
Domain Start End Length (AA) Confidence
N-terminal 1 14 14 0,5528
Central domain 15 213 200 0,2658
C-terminal 214 383 169 0,6648
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-14
Central
15-213
C-terminal
214-383

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XaC1
[NCBI] 		3073039 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNA16191.1 [NCBI]
Genbank nucleotide accession
OR258281 [NCBI]
CDS location
range 345037 -> 346188
strand -
CDS
ATGTTTCCTATTCCTGTCATATCGCAGTACGGCAATAAAGCACCAAAGATGAAGATACAGAAAATGGTAGCATCACAGACTCATCGTGCGTTATTATATGAGAATGGTGAACTTTATACAGCAGGTGCGGGTACATCATACAAAACGGGTACAGGCACAACAAGTACTGATTACCTGAACTGGAGTAAAGTACTTACTGATGTTAAGGATGTTTTTGTAAGTGCTACATGGACGTTAGCAGTTAAAAGGGATAATACTTTCTGGCATTGTGGAGTAAAAACTGGTATATATGGTACAAGCGGGAATAACACAGTTTTTACTGATTGTACGAGTATTATAAATTCAGTTGGTACATACGATCAGATAAGAAAAATAAGAGGTGGTTCAAATAACAGTACTGTTATTTTGCTTAAGAGTGGTGATTTGTATGGGATTGGTACTAACCTTAACTACGAGCTTGGTTTAGGTCATAACAGTACTGTTACCTCATGGACATTAACCAATACATCATGTTCTGAAGTAGAACTACTTTCTGTCAATACCTGGGTAATAAAGAACGGGCAGTACTGGCGTGTTGGTAATAACGCCAATGGTCAGTTAAGTAATAATGGTTTAACAACGTATCAGACCTGGACGGCCTTTGCGAATCCTACCGGCTATGAGCCGTTTCAGGTACAGCCTACGGTTGGTGAGGCATTTCTTCTGATGAAGAGTACCACAGACGGCACCACGCGGATTTACGGAGCGGGTTATAACTACGCTGGCGATCTTACCCTGACGTCTAAAAACGTATCAAACATGACTGCATTAACAGCATACGATGGTTTAGTACAGGATATTAAAAACAGTGGTTCAAGTACTCATATCATGACGTTAACCTGTACTGATGGTTTACGTTCTTCTGGATATAATGTGAAGGGACAATTAGGTATTAACAATACTACAGACCAGAACGTATATGGGTTTATGCCATGTGTAGGATTAAGTACTGATCCTGTACAATTTGTCTGCACACAGTACTATACCTCTAACTACGTAGTCCAGAATGATAAAGTGTATTGGGCGGGTGATGTAACTTATAACTCAAGTACTGGTACTGATTCTTATATTTTTATTCCTTTAAAAACACCATATAACTATAATTCTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
524803b03e018b9d2b834c886cccbbe89c0620b9f6f93137e4191ab3473b5138
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi,L.M., Villicana,M.C., Amarillas,L.A., Carrillo,A. and Leon,J. 2014-03-01 — GenBank