Protein

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Genbank accession
AXC33162.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPTGLLIELNDGGKRMEITAGLRCPSFGANFDSGYQKAKYADIAGYVSGAQVLFIPHATAYLDSGLLHKMNSVTISGGRVTQNSTMKDNSISERESTYTFPGSLWQIFPTGQRSGVGLLISNSTDFTSITNATQSGQCIWKGTVNVPTGGWAVPTIAGYDKSKYVVFGRCNSGNTIDFDGNTVRFFSPPTTNDDAPATGTIDIAIFASGIAPQPGTGLNIFNAEGACTFSTTKRPFVYLNQLWSPSKSAVNIGSGYVPLGRFGLMTHEVNGVYVYRMFGIKIQNGNASVQGGKYLGREQYAIFGNDTVTPLNLPVLPDMYV
Physico‐chemical
properties
protein length:321 AA
molecular weight: 34379,37840 Da
isoelectric point:8,25468
aromaticity:0,10903
hydropathy:-0,10841

Domains

Domains [InterPro]
IPR045604
STR
4–296
IPR045604
AXC33162.1
1 321
Architecture
STR
STR 4-296 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC33162.1
1 321
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,4180
Central domain 11 203 194 0,0126
C-terminal 204 321 117 0,9987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-203
C-terminal
204-321

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AsXd-1
[NCBI] 		2182324 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC33162.1 [NCBI]
Genbank nucleotide accession
MH178096 [NCBI]
CDS location
range 20035 -> 21000
strand -
CDS
ATGCCGACAGGACTACTGATAGAACTAAATGACGGCGGAAAGCGCATGGAGATAACTGCGGGCCTGCGATGCCCGTCGTTTGGGGCCAACTTTGACAGTGGCTACCAGAAAGCCAAATACGCTGATATTGCCGGTTATGTTTCCGGGGCGCAGGTGCTGTTTATCCCGCACGCGACAGCTTACCTTGATTCAGGACTGCTTCATAAAATGAACTCGGTCACCATTTCTGGCGGCAGGGTTACGCAGAACTCTACGATGAAAGACAACAGTATCAGCGAAAGGGAGAGTACTTACACTTTTCCGGGAAGTCTCTGGCAGATATTTCCAACAGGTCAGCGAAGTGGGGTGGGCCTGCTCATCAGCAACAGTACAGACTTTACCTCGATAACTAATGCCACGCAGTCAGGGCAGTGTATCTGGAAGGGTACCGTTAATGTTCCGACCGGGGGATGGGCGGTTCCCACGATAGCAGGATACGACAAGTCGAAGTATGTCGTTTTCGGGCGCTGTAACAGCGGTAATACAATTGACTTCGACGGTAACACAGTCAGGTTTTTCAGCCCTCCGACAACAAATGATGACGCTCCTGCAACCGGCACGATAGACATCGCTATCTTCGCCAGTGGCATAGCGCCGCAGCCTGGTACTGGCCTCAATATTTTTAACGCTGAAGGGGCCTGTACCTTTTCAACCACAAAACGACCTTTCGTATACCTCAATCAACTCTGGTCGCCTTCTAAAAGCGCTGTGAACATAGGCAGCGGGTATGTTCCGCTGGGCAGGTTTGGGTTAATGACCCATGAGGTTAACGGGGTATATGTGTATCGAATGTTCGGTATAAAAATTCAGAATGGTAACGCTTCAGTTCAGGGGGGCAAGTATCTCGGGCGCGAACAATATGCCATTTTTGGTAATGACACGGTAACGCCCCTCAATCTTCCCGTTCTTCCCGATATGTACGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
71d1142128853dd6a2b64076abd775574ce16bde0141e6d5d9cb9685a4a5f8aa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8686
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome analysis of bacteriophage AsXd-1 Ting,W., Fei,M.Y. and Quan,L. 2018-08-10 — GenBank