Protein

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Genbank accession
YAA52906.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEVVYFSEGAVLSGYKVIYDKETQRAYSLPADIGSGVTAISLSPAGVLVHSAGSVDLGALAVTRKEYVTLPDTFTSGSVIQTKNELLTHNGTQYRWAGGLPKSVPLNSTPFSAGGISPTAWVIANDELIRQELNNGLIPPVGSTSVYDVPGIVVNTTTDNRAAAYAFPGKIFIPKGVTIRCNLLPDDDVRKFVGEGKLIVKNQWYAKDHTFDIAASMNGNNKTVNDEIYCAFRDQTFCRIGIIGDSITDGAWGKQDWSSPPTNSDGDLDAPSTYNHSLSGGSHSWTEHWMNGLLLTQSRRSGETIYQSANCSVSGKKLSDGWGYRNFDRGFFGNTRYGAEAPRVCILAMGWNDSSASIATYRDQIDKFVRKAWGYGCAVGIVTVNDNDSVRMAFELSTKKYMADKLGVEYFNLGPNLTSASSRNEQTGYYYYVKKDGTWDTTHPQELGQMAMGNAMYMQTLGNKYCRRVRPGDMITQAAVENYWDCVGYPSGTHYAPQYVPVSGAPALNVFRFLSKCVTNENVTMTTMVWCEEEGMTVSLLEPWTNAAVVGQQHNIRVESPAGKALIESGEYQERNTQINAYRTVLNGKTAMSYFGGGKTLTTYMGRLRKGLNFIRYIIDGSPTDAYFPMLKFGSYKTDGVKLPMVRLSKEPNMTRPAPVMKQSNANDYGVFGEVLSGTQFSKTADSHLYNGASVGYLAVPKGLKKNTYIALNYNPLTNVGVLVGVNAAGNMCIGTFNNTNPTDWVVFGDTTREDKGFKVWEYTSASTGAHTFTVESDDGTATTSAFSTTVATSGYVGLYNTSASSQLFTLEYSMTIGNVG
Physico‐chemical
properties
protein length:851 AA
molecular weight: 92722,00390 Da
isoelectric point:7,14957
aromaticity:0,10693
hydropathy:-0,30458

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–96
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR049297 SSF52266 DC_2010
G3DSA:3.30.2020.50
ATT
1–100
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR036514 IPR054153 IPR055017
IPR040775
RBD
91–153
IPR040775 IPR036514
cd00229
ENZ
270–487
cd00229
YAA52906.1
1 851
Architecture
ATT
STR
RBD
ATT 1-155 | STR 179-493 | RBD 494-848 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAA52906.1
1 851
Domain Start End Length (AA) Confidence
N-terminal 1 183 183 0,9823
Central domain 184 382 200 0,7844
C-terminal 383 851 468 0,6290
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-183
Central
184-382
C-terminal
383-851

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage 10GB
[NCBI] 		3446674 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAA52906.1 [NCBI]
Genbank nucleotide accession
PV805630.1 [NCBI]
CDS location
range 60610 -> 63165
strand -
CDS
ATGAACGAAATGTTCTCACAAGGTGGTAAGGGTTCAACTGGAATCTTAACCAATAAACAAGCAGTAGCCCGTCACTTCGGGGTTAAGCAATCAGAGGTTGTTTACTTCTCAGAGGGTGCTGTACTAAGTGGATATAAAGTCATCTACGACAAAGAGACACAACGTGCTTATTCCTTACCTGCTGACATTGGTTCAGGGGTTACTGCTATAAGCCTTAGTCCTGCTGGTGTATTAGTTCACTCTGCTGGTAGCGTGGACTTAGGTGCATTAGCTGTTACTCGCAAAGAATATGTAACTTTACCGGATACGTTTACTTCTGGCTCAGTTATACAGACCAAGAATGAATTGCTTACTCATAATGGCACGCAGTATCGCTGGGCTGGTGGGTTACCCAAGAGCGTACCACTTAACTCTACTCCGTTTAGTGCAGGTGGTATTTCTCCCACTGCATGGGTTATTGCTAATGATGAATTAATACGACAAGAATTAAACAATGGGCTAATTCCTCCTGTTGGTTCTACTTCCGTATATGATGTTCCTGGCATTGTTGTTAATACTACTACGGATAACCGTGCAGCTGCTTATGCTTTCCCCGGTAAAATCTTTATCCCTAAGGGTGTTACCATTCGTTGTAACTTACTACCCGATGATGATGTCCGTAAGTTTGTTGGGGAAGGCAAACTTATTGTTAAAAACCAGTGGTATGCAAAGGACCATACGTTTGACATTGCTGCTTCAATGAATGGTAACAATAAAACCGTTAATGACGAAATATACTGTGCATTCCGTGACCAGACATTTTGTCGTATCGGTATCATTGGCGATTCCATTACTGATGGTGCATGGGGTAAACAGGATTGGAGTTCTCCGCCAACTAACTCAGATGGTGACTTAGATGCCCCAAGTACATACAATCATTCTTTATCTGGGGGTTCCCACTCATGGACTGAACACTGGATGAATGGCTTGTTGCTCACACAGTCTCGTCGTAGTGGTGAAACTATTTACCAATCAGCTAACTGTTCCGTATCTGGTAAGAAGTTATCCGACGGTTGGGGCTATCGTAACTTCGACCGTGGGTTCTTCGGTAACACACGCTATGGTGCAGAAGCTCCTCGTGTATGTATCCTTGCAATGGGTTGGAATGACAGTAGTGCTAGTATCGCTACCTACCGTGACCAGATTGACAAGTTTGTTCGTAAAGCATGGGGCTACGGTTGTGCCGTTGGTATTGTAACAGTCAACGATAATGACTCAGTACGTATGGCATTTGAGCTTAGTACTAAGAAGTACATGGCAGATAAACTAGGTGTTGAGTATTTTAACTTGGGACCAAATCTGACTAGTGCAAGTAGCCGCAATGAGCAAACTGGGTACTACTACTATGTTAAGAAGGATGGAACCTGGGATACTACTCACCCACAAGAACTTGGACAAATGGCTATGGGTAATGCGATGTATATGCAGACCCTTGGTAATAAGTACTGTCGTCGTGTTAGACCGGGGGATATGATCACTCAGGCTGCTGTAGAAAACTATTGGGATTGTGTAGGGTATCCTTCCGGTACTCACTATGCACCACAGTATGTACCTGTATCTGGTGCTCCTGCTCTGAACGTATTCCGTTTTCTGTCTAAGTGTGTAACTAATGAAAATGTAACCATGACCACAATGGTATGGTGTGAAGAAGAAGGTATGACTGTATCCCTTCTAGAACCATGGACTAATGCTGCCGTTGTTGGGCAACAGCACAACATCCGTGTTGAGTCTCCTGCGGGCAAAGCATTGATTGAGTCCGGTGAATACCAAGAGCGTAATACTCAAATTAATGCCTACCGTACCGTGCTTAATGGCAAGACTGCCATGAGTTACTTTGGGGGTGGCAAAACCCTTACTACCTATATGGGGCGATTACGTAAAGGTTTGAACTTTATCCGTTATATCATTGATGGTAGTCCTACTGATGCTTACTTCCCTATGCTGAAGTTTGGTTCTTACAAAACGGATGGGGTTAAGCTGCCGATGGTTCGTCTTAGCAAAGAACCTAACATGACCCGCCCTGCTCCAGTAATGAAGCAGTCTAACGCCAATGACTATGGTGTATTTGGTGAAGTTTTGTCTGGTACTCAGTTCAGTAAAACCGCAGACTCTCACCTTTATAATGGTGCATCTGTAGGTTATCTGGCTGTACCGAAAGGTCTTAAGAAAAACACCTATATTGCACTTAACTATAACCCACTTACTAATGTTGGTGTGTTAGTCGGTGTGAATGCTGCAGGTAATATGTGCATCGGTACGTTCAACAATACTAACCCAACTGACTGGGTAGTATTTGGTGATACTACTCGTGAAGATAAAGGCTTTAAAGTATGGGAATATACTTCCGCCTCTACTGGTGCTCATACCTTTACCGTAGAGTCAGATGATGGCACGGCAACTACGTCTGCATTCTCTACTACTGTAGCTACATCTGGTTATGTAGGATTATATAACACGTCTGCTTCTAGTCAGTTATTTACTCTTGAGTACAGCATGACTATTGGTAATGTGGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c884fab24d94551b1306ca3048dfdc0221e7d707da694e8b3ef56a7a25395826
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8848
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50