Protein

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Genbank accession
BDR26176.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,52
Protein sequence
MLKIKGSPSVGKISATINRPFLTKTLVTTMPQNIANFTAGYGGGMLHIFGGEAVPSVGQIQIYRRYNIATNTWLSPSGNIGAWAWGGGGYYNGSFWALCGSNNGYNTSYFQINPSTATGTRYTDMAGGSRGQGRTASVDNLNVFVIGGIGQNNITNALCYRFNASTRAWTVRTSMPSPRNGHTIGSYNGKIYVLGGWNETSNNLSDVLEYNISTNTWTTLPTTIPGAPSSWFGGFVYKQYAVYGASSSSNTLLFKILDLNKMTWEILDTGLPRRWSAEYVVTETGVYMIGGSSSYPGASNYFTAPRYNEIYFFKG
Physico‐chemical
properties
protein length:315 AA
molecular weight: 34241,95360 Da
isoelectric point:9,51723
aromaticity:0,13968
hydropathy:-0,22032

Domains

Domains [InterPro]
IPR015915
STR
24–129
IPR015915 PF24681
PTHR46093
Unmapped
47–223
PTHR46093
IPR015915
STR
88–314
IPR015915
IPR015915
STR
93–297
IPR015915
IPR006652
STR
142–189
IPR006652 IPR006652
BDR26176.1
1 315
Architecture
STR
STR 24-314 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BDR26176.1
1 315
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,1108
Central domain 48 251 205 0,5326
C-terminal 252 315 63 0,5804
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-251
C-terminal
252-315

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. 30-3
[NCBI] 		2972143 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR26176.1 [NCBI]
Genbank nucleotide accession
LC727698 [NCBI]
CDS location
range 185006 -> 185953
strand +
CDS
ATGTTGAAAATAAAAGGAAGTCCATCCGTAGGCAAAATATCAGCAACAATTAATAGACCGTTTTTAACTAAAACCTTAGTTACTACGATGCCACAAAACATTGCAAATTTTACTGCAGGATATGGTGGCGGAATGTTGCATATATTCGGAGGCGAAGCTGTTCCTAGTGTAGGCCAAATACAAATATATAGACGATACAATATAGCAACTAATACTTGGTTAAGTCCTAGCGGAAACATAGGAGCCTGGGCATGGGGAGGAGGCGGATATTACAATGGAAGTTTTTGGGCGCTGTGCGGTTCTAACAATGGATATAATACTTCGTATTTTCAGATAAACCCTTCCACTGCAACAGGTACACGATATACAGATATGGCCGGCGGTTCTAGAGGACAAGGAAGAACCGCATCAGTAGATAATCTAAACGTATTTGTTATAGGGGGTATTGGGCAAAATAATATAACAAATGCATTGTGTTATAGATTTAATGCTAGTACAAGAGCGTGGACAGTAAGAACAAGTATGCCATCGCCAAGAAATGGTCATACCATAGGATCGTATAACGGGAAAATATATGTACTAGGAGGTTGGAACGAAACATCAAACAATCTTTCAGACGTTCTAGAATACAACATATCTACTAATACGTGGACAACTTTACCTACTACAATACCGGGAGCACCTTCTAGCTGGTTCGGCGGGTTTGTATATAAACAATATGCTGTATACGGCGCGTCATCTTCTTCTAATACGCTTTTATTTAAAATATTAGATTTAAATAAAATGACATGGGAAATTTTAGATACCGGGTTGCCACGCCGCTGGTCAGCAGAATATGTAGTTACAGAAACCGGTGTATATATGATAGGCGGTAGTAGTTCTTATCCCGGTGCGTCCAACTATTTTACTGCCCCTAGATATAACGAAATATATTTCTTCAAAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b94876b92bd7196715ae4b7cc014bbf1ee9a4748e23f212d218acabbc3ee25e0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9119
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage 30-3 Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank