Protein
View in Explore- Genbank accession
- GENB_bcb5d6d680bf [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TSPTSPTSPTSP
- Protein sequence
-
MLQVKSFSGATHAEQIQNAINAASVSTTDKTVQLEEFKDYYITAPIIVKKNVELLFGYGTKLVVGGNVRVLELELNASVTNPYIAIDDPTFDSAVFYLDGKNKFYNTWNRTSIKNGVIVNWSGSHKGVGISCFSGGTGHEVSFVNFFDIKMVGLRRGIELKATKPTTGMSWVNANRFKDISFDDCVEMIVIESSETIPNECSGNMFTGLQIQPSAATQIIFKVNGQQNRFEGMLWDTHLITNTGAFVQFTNTSSYNKIDFNGSVPTAKVSDAGAFNKVL
- Physico‐chemical
properties -
protein length: 279 AA molecular weight: 30664,36650 Da isoelectric point: 6,10265 aromaticity: 0,10753 hydropathy: -0,08638
Domains
Domains [InterPro]
IPR011050
STR
13–252
STR
13–252
IPR012334
STR
13–274
STR
13–274
DC_0399
RBD
213–279
RBD
213–279
1
279
Architecture
STR 13-279
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
279
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 12 | 12 | 0,8695 |
| Central domain | 13 | 268 | 257 | 0,9925 |
| C-terminal | 269 | 279 | 10 | 0,2750 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-12
1-12
Central
13-268
13-268
C-terminal
269-279
269-279
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
No CDS data available.
Genome Context
Genome Context
Tertiary structure
PDB ID
4f2898475453734d73be955350d396f58e21834a024fbd1b64642851381e8b4e
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50