Protein

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Genbank accession
BDD79456.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTTINASTRLIKIGAEGQANTYPVYMGQVRQDNPNISFPDETEEEYLNGLGYFIVQEVAQPTGDVVTEGDPVFANGVWSQVWNVRSFTADEVASQLDVTKTAMMTDITNKLTAALEKGFSFAFSDVAGHVQLRDGDRGNIASARIRADKLVTQGVTDAVMPFRDWENVTHMCTPAQIVDLSDAAYEAYLGFLGAGWTLKDAVTKAATAADLPAVPAEITLPS
Physico‐chemical
properties
protein length:222 AA
molecular weight: 23971,56160 Da
isoelectric point:4,37856
aromaticity:0,08559
hydropathy:-0,09820

Domains

Domains [InterPro]
DC_0635
STR
1–157
DC_0635
IPR025484
STR
100–210
IPR025484
BDD79456.1
1 222
Architecture
STR
STR 1-210 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage FLC8
[NCBI] 		2906466 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia glumae
[NCBI] 		337 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDD79456.1 [NCBI]
Genbank nucleotide accession
LC667450.1 [NCBI]
CDS location
range 156169 -> 156837
strand -
CDS
ATGACGACCATCAACGCGTCTACCCGCCTGATCAAAATCGGTGCGGAAGGTCAAGCCAACACCTATCCCGTGTACATGGGTCAAGTGCGGCAGGACAACCCCAACATCTCGTTCCCGGACGAAACCGAAGAGGAATACCTCAACGGTCTGGGTTACTTCATCGTTCAGGAAGTAGCTCAGCCGACGGGAGACGTCGTGACCGAAGGCGATCCTGTCTTCGCAAACGGCGTGTGGTCTCAAGTCTGGAACGTTCGCTCGTTCACGGCCGATGAAGTGGCATCGCAGTTGGATGTCACGAAGACGGCCATGATGACGGACATCACCAACAAACTGACGGCTGCTCTGGAAAAGGGCTTCTCGTTCGCGTTCTCCGATGTGGCTGGCCATGTGCAGTTGCGCGACGGTGATCGCGGTAATATCGCCAGCGCCCGCATTCGCGCGGACAAGCTGGTCACTCAGGGTGTTACCGATGCGGTGATGCCTTTCCGTGACTGGGAGAACGTGACCCACATGTGTACTCCGGCACAGATCGTGGACTTGTCGGATGCAGCCTACGAAGCGTATCTTGGCTTCTTGGGCGCGGGCTGGACACTGAAGGACGCTGTGACGAAAGCTGCTACGGCAGCAGACCTCCCGGCAGTTCCGGCAGAGATCACGCTTCCGTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
82a3871e3364ff102e5bf7dca55075c72235f6dd285cf0c10add52d394caedce
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9442
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Optimal preservation method of new biocontrol agent Burkholderia jumbophages having a potential suppressing rice seedling rot disease Kanaizuka,A., Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2022-11-19 — GenBank