Protein

View in Explore
Genbank accession
QGH71336.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MALIFQPNTLRELFGSRYSQIQTLNIDISVTENLSLRQNVTDKPVQDGARISDNIILLPDQVSIEGLFIDDAYAAASELLGGAPVIGTTWEEKLFMLQTIRKAREPFTIVTSFGAFNNMYFDGDIVAMKHANNANALHFTASLTGIGIIKSRTTAVPANDTKNPKKHAPASDKGKIQKSEKANINSKTTAATVTQEKSKSMLYHGMEWINKRWGN
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23715,73250 Da
isoelectric point:9,04667
aromaticity:0,07442
hydropathy:-0,29860

Domains

Domains [InterPro]
IPR048494
ATT
27–157
IPR048494
IPR048494
ATT
27–150
IPR048494 DC_1991
QGH71336.1
1 215
Architecture
ATT
RBD
ATT 27-157 | RBD 158-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_Yen_X1
[NCBI] 		2663327 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGH71336.1 [NCBI]
Genbank nucleotide accession
MN617773.1 [NCBI]
CDS location
range 41848 -> 42495
strand -
CDS
ATGGCGCTTATATTTCAACCTAACACACTAAGGGAGCTTTTCGGCTCCCGATACTCACAGATTCAAACCTTGAACATCGACATTTCAGTAACGGAGAATTTAAGCCTACGTCAGAACGTTACTGATAAGCCTGTTCAGGATGGGGCGCGAATCAGTGATAACATAATCCTACTTCCGGATCAGGTGAGCATTGAGGGGCTGTTTATCGATGATGCTTACGCGGCTGCTTCCGAGTTGCTAGGCGGTGCTCCGGTTATCGGTACAACATGGGAAGAAAAGCTGTTCATGTTGCAGACAATCCGAAAGGCTCGCGAGCCGTTTACAATCGTGACCTCATTCGGTGCGTTTAACAACATGTACTTTGATGGTGACATTGTAGCGATGAAGCACGCAAACAACGCAAACGCGCTACACTTCACAGCCAGCTTAACCGGTATCGGGATCATCAAGAGCCGCACCACGGCGGTTCCTGCTAACGATACAAAGAATCCCAAAAAGCACGCTCCAGCATCCGATAAGGGCAAGATCCAGAAGTCGGAAAAGGCCAACATAAACAGCAAGACAACGGCGGCAACCGTTACGCAAGAGAAATCAAAATCTATGCTATATCATGGCATGGAGTGGATTAACAAAAGATGGGGGAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7b1ae07c8617f216a57a67afffe50441d101d238b9b57621f4c72470813c8fc9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7069
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage vB_Yen_X1 administered orally efficiently protects a murine chronic enteritis model against Yersinia enterocolitica infection Xue,Y. 2020-03-06 — GenBank