Protein

View in Explore
Genbank accession
WDS38270.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,70
Protein sequence
MTSFDTWIEQDSLLVADIAAGEYDAATGAAMRKALALSTGWIATTNPVLAKDVALATKTLQESPEEFQAWASGTLTGGYNADGSPSNGVAPNGGYYPITLPGDDGTRIFIKSPAKIVSGTLKGDTGDKGWAPVIVSVADGSRRVFQVVDWTGGQGTKPAAGYVGPAGVVPNIANAVDFFAAITDQIASITADRVAAQTARAGAEAASSQANATVASWSDTQVIGRAVAGVNAADAAAGTRVMANPAAHDGVVKKMRLYASASGTLKLRVFSKSGATFTQVGVDYPVAVSVGAAEYNIAVPLLAGQYLGFYAPTGTQDYITGVTFDQDDGGYYATVGDSTSFDASITRTIQLQIGFDLQYVAITKARVDAVETTALAASTVSGTALVKANAVDGQVQALTALETIGRPIAGVSATAPSAGTFVFATPAVHSGVVKKVRGYVTGASTVKLRVFSKAGDTFTQVGDEVSVSMVPGASELPVVMPIATGQFLGFFTPANGVNYQAGVSSSVDYGGYYAAAGDVTTFDDSTVGRTVQLQFGFDIEYVAVTKARVDAVETTANGASAVAAANVAKVTAIQGALTQLATIGRATTPVTGSGAGNTTYAFNEPLTAGGVVEVFEVFVLGAGAAEFKLRRFSKTGDNFVQLGSDKVLNLVPGLNAIGSDQLSDWPVSAGDYLGFFAPTNRLAYTNNTSESGGWWGGAGDVTSFTDNTVNTTLRLEAAFHVRERAIPETAVLSSRIGAVEATTATLLGSMAVYAKTTGSRASNGLIFDPDAGSFYAWSFAADVGIDVATNQAIDTVTCRLKVVAGGEKVRLMVYSRPTPSSGADGVPGAIGDTLLGTTTTTLASLGLTVGAFGTANLPLPSIITPAAGTTLVFEIDALDASNARVESGIDRANAGTLNQRQRGWYRNGPVSAWSTISAGSALAWSLKGNRYTLPDLDTRVAALEQGSGAAVDLLLAAYPTIGLTGFGVTIGGAIHKNGVDLSTSSVIALTPAAAGKERLDIIVADKITGTVSVVAGTERNVNYDAIEYIPAVTAQAAHLATVLVGETAAIAVNAAQFRGLIKVGREGEFSAHVARNRRILRKVIGKAGRGAAIKWGGYGDSLTALQNTSLKPGTLAAQYVANGSWRDLTSWYFSDYPSDTKAMIDADRAARGNMGWNWAVKRALDELAGAAVTTYNNYGIGSTTSQNSLTADSGTGLPNGLYPDRIAVPLADGLDAVAIAFGMNERGQTYTYANIVNMIGQFQAVGTICVVIGVPRPNGRNSVSAWRYTNDALEAAAMDAGAAFVSTAMISDDRNLGGIGAPAECLGATNEATSGNPGNHPGLYEHKQYERAAVMQLGF
Physico‐chemical
properties
protein length:1339 AA
molecular weight: 137791,64950 Da
isoelectric point:5,11258
aromaticity:0,07991
hydropathy:0,10321

Domains

Domains [InterPro]
DC_0863
STR
99–448
DC_0863 IPR036514
DC_0863
STR
444–627
DC_0863 SSF52266
WDS38270.1
1 1339
Architecture
STR
STR
STR 99-627 | STR 1086-1321 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage TMCBR3
[NCBI] 		3028190 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Caulobacter segnis
[NCBI] 		88688 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS38270.1 [NCBI]
Genbank nucleotide accession
OQ330849.1 [NCBI]
CDS location
range 19055 -> 23074
strand +
CDS
GTGACGTCGTTCGATACTTGGATTGAGCAGGACTCGCTGCTGGTCGCGGATATCGCGGCCGGGGAGTATGACGCGGCGACCGGTGCAGCGATGCGAAAAGCCCTGGCGCTGTCCACCGGCTGGATTGCCACCACGAACCCGGTCCTTGCCAAGGACGTGGCGCTGGCCACGAAGACGCTGCAAGAGTCGCCTGAAGAATTCCAGGCCTGGGCGTCCGGCACCCTGACGGGCGGTTACAACGCGGATGGCTCGCCCAGTAACGGTGTAGCGCCGAACGGCGGATATTACCCCATCACCCTGCCGGGTGACGATGGAACCCGTATCTTCATCAAGTCCCCGGCCAAGATCGTTTCCGGCACCCTTAAGGGTGACACGGGGGACAAGGGTTGGGCGCCCGTTATCGTGTCGGTGGCTGATGGCTCCCGCCGTGTGTTCCAAGTTGTCGATTGGACCGGCGGTCAGGGAACTAAGCCTGCCGCTGGGTATGTTGGACCGGCTGGCGTAGTTCCGAATATCGCGAACGCCGTCGATTTCTTCGCGGCGATCACCGATCAAATCGCCAGCATCACCGCAGATCGTGTTGCCGCACAAACGGCCAGAGCCGGGGCGGAAGCGGCCTCTAGCCAAGCTAATGCCACTGTGGCGTCATGGTCGGACACCCAAGTAATTGGCCGGGCAGTTGCGGGTGTGAACGCGGCAGATGCCGCCGCTGGAACGCGGGTAATGGCAAATCCGGCGGCTCATGACGGCGTAGTTAAGAAGATGCGCCTCTATGCCAGCGCTTCGGGAACGCTGAAGCTGCGGGTTTTTTCCAAGTCCGGGGCCACCTTCACCCAAGTTGGCGTTGACTATCCTGTTGCCGTTTCGGTGGGTGCTGCCGAGTACAATATTGCTGTGCCATTGTTGGCAGGCCAATATCTCGGGTTCTATGCGCCCACGGGTACGCAAGATTACATCACCGGCGTCACGTTCGATCAGGATGACGGCGGGTACTATGCGACCGTTGGCGATTCTACGTCGTTTGATGCTTCGATCACCCGAACGATTCAGCTTCAGATTGGCTTTGATCTTCAGTACGTGGCCATAACCAAGGCCCGTGTGGATGCGGTAGAGACCACGGCTCTAGCAGCCTCCACCGTGTCGGGCACGGCTCTGGTAAAGGCCAACGCGGTAGACGGGCAGGTGCAGGCGCTGACGGCGCTGGAAACCATCGGGCGACCTATCGCTGGCGTAAGCGCGACCGCCCCGTCTGCGGGGACCTTTGTTTTCGCCACGCCTGCCGTTCATTCTGGGGTGGTCAAGAAGGTTCGGGGATATGTCACCGGTGCCAGCACTGTAAAGCTGCGCGTCTTTTCCAAAGCGGGAGACACGTTCACCCAAGTTGGCGACGAAGTGTCCGTTTCCATGGTCCCCGGCGCTAGTGAATTGCCGGTGGTTATGCCTATCGCCACCGGACAGTTCTTGGGGTTCTTCACGCCAGCAAACGGCGTCAACTATCAGGCCGGAGTCAGTTCAAGCGTTGACTATGGCGGATACTACGCCGCTGCTGGAGATGTTACGACTTTCGACGACTCCACCGTAGGACGGACTGTCCAGCTCCAGTTTGGGTTTGATATCGAGTACGTGGCCGTAACCAAGGCCCGCGTGGATGCGGTAGAGACCACGGCCAACGGTGCTTCAGCAGTCGCTGCTGCGAACGTGGCGAAAGTGACGGCTATACAGGGCGCATTGACCCAACTGGCGACGATCGGCCGGGCAACCACTCCGGTAACCGGCAGTGGAGCCGGAAACACCACATATGCTTTTAACGAACCTCTAACCGCCGGGGGCGTGGTCGAGGTGTTCGAGGTTTTTGTACTTGGCGCGGGGGCGGCTGAGTTCAAGCTTCGGCGTTTCAGCAAGACGGGTGACAACTTCGTCCAGCTTGGAAGTGACAAGGTTCTAAATCTCGTTCCGGGGCTCAATGCCATTGGGAGCGATCAACTGTCCGACTGGCCGGTCAGCGCCGGTGATTATCTGGGATTCTTCGCCCCGACCAACCGCCTTGCCTACACGAACAATACGTCTGAAAGCGGCGGGTGGTGGGGCGGCGCGGGCGACGTCACGTCGTTCACCGACAACACGGTGAACACGACTTTGCGTCTTGAAGCCGCTTTCCATGTTCGCGAGCGCGCTATTCCTGAGACGGCAGTTCTGTCTAGCCGCATTGGAGCGGTCGAGGCTACTACAGCCACGCTGCTGGGCTCGATGGCGGTCTATGCCAAAACGACGGGTTCCCGCGCATCCAACGGTCTGATTTTCGACCCAGACGCAGGTTCTTTCTACGCCTGGAGCTTCGCGGCTGATGTCGGGATTGACGTAGCCACAAACCAAGCCATCGACACGGTAACGTGCCGCCTGAAGGTGGTTGCGGGCGGCGAGAAAGTGCGCCTGATGGTATATTCCCGGCCGACGCCCAGCAGCGGCGCGGACGGGGTTCCCGGCGCAATTGGTGATACGCTTTTGGGAACGACGACCACGACGCTTGCGAGTCTTGGTCTGACTGTGGGTGCGTTCGGAACGGCAAACTTGCCGTTGCCCTCGATTATCACCCCGGCGGCGGGAACTACTCTGGTATTCGAGATTGACGCCCTAGACGCCAGTAACGCGCGTGTTGAGAGCGGTATTGACCGGGCCAATGCTGGCACGCTCAATCAGCGTCAACGGGGATGGTATCGCAACGGCCCGGTCAGTGCGTGGTCAACGATCAGTGCAGGTTCCGCCTTGGCATGGTCGTTGAAGGGCAATCGCTATACTTTGCCGGACCTCGACACCCGTGTTGCGGCCTTGGAACAAGGCTCTGGTGCTGCGGTTGATTTGCTTCTGGCGGCCTATCCAACCATCGGCTTGACGGGCTTTGGCGTCACGATCGGCGGCGCGATCCATAAGAACGGAGTTGACCTTAGTACAAGTTCGGTGATCGCACTTACGCCCGCAGCTGCGGGCAAGGAGCGCCTTGACATTATCGTGGCCGACAAGATCACGGGTACTGTTTCGGTAGTCGCTGGAACAGAGCGAAACGTGAACTATGACGCTATCGAGTATATCCCGGCGGTGACGGCGCAGGCGGCGCACCTCGCTACGGTTTTGGTCGGGGAAACGGCAGCCATTGCCGTGAACGCCGCGCAATTCCGAGGCCTGATCAAAGTGGGGCGTGAGGGCGAGTTCTCCGCCCACGTCGCCCGTAACCGTCGAATTCTGCGCAAGGTCATTGGTAAGGCGGGCCGGGGTGCTGCGATTAAGTGGGGTGGTTATGGCGACAGCCTTACCGCGCTGCAAAACACCAGCTTGAAGCCTGGCACTCTGGCCGCTCAGTACGTCGCCAACGGGTCTTGGCGCGATCTTACGTCCTGGTATTTTTCGGACTATCCGAGCGACACTAAGGCCATGATCGACGCCGACCGCGCGGCGCGTGGGAACATGGGGTGGAATTGGGCGGTTAAGCGGGCCCTTGACGAATTGGCCGGGGCGGCGGTCACGACGTATAACAATTACGGTATCGGGTCCACGACTAGCCAGAATTCGCTTACGGCTGACAGCGGCACCGGCCTGCCTAACGGGCTGTATCCAGACCGTATTGCTGTTCCTCTCGCCGATGGTTTGGATGCGGTCGCTATCGCGTTCGGCATGAACGAGCGCGGGCAAACCTACACCTATGCGAACATCGTCAACATGATTGGACAGTTCCAGGCCGTAGGAACGATTTGCGTCGTGATCGGTGTTCCGCGCCCGAATGGTCGAAACTCTGTTTCGGCCTGGAGGTACACGAACGATGCTCTGGAGGCGGCGGCCATGGACGCGGGGGCGGCTTTTGTCTCCACGGCAATGATTTCTGACGATCGCAACCTTGGTGGGATCGGAGCGCCCGCCGAGTGCCTTGGCGCTACCAATGAGGCCACGTCAGGCAACCCCGGAAACCATCCAGGCCTGTACGAGCACAAGCAATATGAAAGGGCTGCTGTTATGCAGCTTGGGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
154ffde361362e35f0d85cf6200813b8773650cce8212b9635095618003c4b88
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New species of Caulobacter bacteriophages in the Kronosvirus genus that infect the plant growth-promoting Caulobacter strain CBR1 Mohammadi,T. and Millwood,A. 2024-04-20 — GenBank