Protein

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Genbank accession
UKH48604.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKETNTKLEESRSLAIVAAVSSIDVQERRDKLNMLEAAMLQEEQVAIDVNHRFNGGIYAREITIPKGTLLTGRIHKFDHFDIMLSGDISVSTDTGEVKRLTGLNIMEGKAGKKRAGYAHEDTHWITFHCAEERNPEEMYEFLTCGSFEELEEFNYLLEQAMKQIEHDEQVLTEHAQALIDGSKGESCQ
Physico‐chemical
properties
protein length:188 AA
molecular weight: 21319,71820 Da
isoelectric point:4,91375
aromaticity:0,06383
hydropathy:-0,51277

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValP_FGH
[NCBI] 		2911663 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKH48604.1 [NCBI]
Genbank nucleotide accession
OL762410.1 [NCBI]
CDS location
range 19271 -> 19837
strand +
CDS
ATGAAAGAGACAAATACAAAATTGGAAGAATCACGCTCGCTGGCTATCGTTGCCGCCGTTTCTTCAATTGACGTTCAAGAGCGCCGGGATAAGCTCAATATGCTTGAGGCTGCAATGCTTCAAGAAGAGCAAGTTGCTATTGATGTTAACCACCGCTTTAACGGTGGCATTTACGCCCGTGAGATTACCATCCCAAAAGGTACGTTGCTCACTGGTCGCATTCATAAGTTTGACCACTTTGACATTATGCTGAGTGGTGACATTTCGGTTTCAACCGATACCGGGGAAGTGAAGCGCCTGACCGGGCTCAACATCATGGAAGGCAAGGCAGGGAAGAAGCGAGCCGGGTACGCTCATGAAGATACCCACTGGATCACCTTCCATTGTGCTGAAGAGCGCAACCCTGAAGAAATGTATGAGTTTCTAACGTGCGGCTCCTTTGAAGAGCTGGAAGAGTTTAACTATCTACTTGAGCAGGCAATGAAGCAGATTGAGCATGATGAACAGGTTTTAACTGAACATGCTCAAGCTTTAATTGATGGCTCTAAGGGGGAATCATGTCAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1452aefe081c3eb31866c077bffc51702ca7ccb4b680da8e9ee217bc9788a5d2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9345
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete sequence of phage Podoviridae sp. vB_ValP_FGH Wang,P. and Wang,X. 2012-12-15 — GenBank