Protein
View in Explore- Genbank accession
- AEL21643.1 [GenBank]
- Protein name
- minor tail subunit
- RBP type
-
TSP
- Protein sequence
-
MGAELAKEYIDAWISYVSPAGQVFYLAGPQAPVAGAQNGFVLQEIRGVQAPITHLTSKGARQDGDTWNDSIYESAELDFTVEASGVTTQDTRREVRSWVDAWTPKKLGKFSWFTPENGEWWMDVRQHKNVPDVLSHVRSKRQVFTWTAVNNDAFWKSFDSVSAFGITYEDETDEFDRVDHTGLGDGYIQTYTGDEDAGVCGTDGTVMRWYPGSSKGTRYVHNLFIADKPSSDNVIVSFTYSGIQRFPFPAPAVNELWARCGVVDDGEGGQAWDGSGIRMQLVGQNVSISVFKDHEMIHTWIRPLLIAPLWGEKWTLVCGSAKNGRQYRVLRGDPGFEVLSYTEPKTESYMDEDHRYTGHGMKATAGLLNTQVLPAEIHRFSFADNLQAGQSGHLALSNRGDQDGWPRYLCYGPGTFKFSNGPGAEPTITFGPLLEGQVVMLTTLPRLRSVIDLSPNQPTEQQLSAFQGLIKDLISFATNNNVPPLLQQFESWFGILPPQGNLYELLDGRFTVPIPPKPEDGPPETSFISVSISGATIDSKVVAALTPLRKWPE
- Physico‐chemical
properties -
protein length: 553 AA molecular weight: 61317,87360 Da isoelectric point: 5,02453 aromaticity: 0,11212 hydropathy: -0,36221
Domains
Domains [InterPro]
DC_0305
ATT
1–155
ATT
1–155
IPR055681
STR
151–386
STR
151–386
1
553
Architecture
ATT 1-155 | STR 156-395 | RBD 396-553
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
553
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 343 | 343 | 0,6105 |
| Central domain | 344 | 542 | 200 | 0,1635 |
| C-terminal | 543 | 553 | 10 | 0,7351 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-343
1-343
Central
344-542
344-542
C-terminal
543-553
543-553
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Mycobacterium phage Lilac [NCBI] |
1070990 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Mycobacterium smegmatis str. MC2 155 [NCBI] |
246196 | Bacteria > Actinobacteria > Actinobacteria > Corynebacteriales > Mycobacteriaceae > Mycobacterium |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AEL21643.1
[NCBI]
Genbank nucleotide accession
JN382248
[NCBI]
CDS location
range 17594 -> 19255
strand +
strand +
CDS
ATGGGGGCGGAGCTGGCGAAGGAATACATCGACGCATGGATTTCCTACGTCAGCCCAGCCGGTCAGGTGTTCTACCTGGCCGGTCCCCAGGCTCCCGTCGCGGGAGCGCAGAACGGCTTTGTCCTCCAAGAGATTCGGGGCGTGCAAGCCCCCATCACCCACCTGACAAGCAAGGGTGCTCGCCAAGACGGCGACACCTGGAACGACTCCATCTATGAATCCGCCGAGCTCGACTTCACTGTCGAGGCATCCGGCGTCACCACCCAGGACACCCGGCGCGAGGTTCGCAGCTGGGTGGACGCCTGGACCCCCAAGAAGCTGGGCAAGTTCTCCTGGTTCACCCCGGAGAACGGTGAGTGGTGGATGGATGTCCGCCAGCACAAGAACGTGCCGGATGTCCTCTCCCACGTCCGCAGCAAGCGCCAGGTCTTCACCTGGACCGCGGTCAACAACGACGCCTTCTGGAAGTCCTTCGACTCGGTCAGCGCCTTCGGCATCACCTACGAGGACGAGACCGACGAGTTCGACCGGGTCGACCACACCGGCCTGGGCGACGGGTACATCCAGACCTACACGGGCGACGAGGACGCAGGCGTCTGCGGCACCGATGGCACCGTAATGCGTTGGTACCCGGGAAGTTCCAAGGGCACCCGCTACGTGCATAACCTGTTCATCGCGGACAAGCCCTCCTCCGACAACGTCATCGTCTCCTTCACCTACAGCGGCATCCAGCGCTTCCCGTTCCCCGCACCCGCGGTCAACGAGCTCTGGGCGCGCTGCGGCGTGGTCGATGACGGCGAGGGTGGGCAAGCCTGGGACGGCAGTGGCATCCGTATGCAGCTGGTCGGCCAGAACGTCTCCATCTCGGTCTTCAAGGACCACGAGATGATCCACACATGGATCAGGCCGTTGCTGATCGCCCCGCTGTGGGGTGAGAAGTGGACGCTGGTGTGCGGCTCCGCTAAGAACGGCCGCCAGTACCGCGTGCTGCGCGGTGACCCCGGCTTCGAGGTGCTGTCCTACACCGAGCCCAAGACCGAGTCCTACATGGACGAAGACCATCGCTACACCGGGCACGGCATGAAGGCCACCGCGGGCCTGCTCAACACGCAGGTGCTCCCCGCGGAAATCCACCGCTTCTCCTTCGCCGACAACCTCCAGGCCGGTCAGTCCGGGCACTTGGCGCTGTCGAACCGCGGAGACCAGGACGGGTGGCCGCGCTACCTCTGCTACGGACCCGGCACCTTCAAGTTCAGCAATGGACCCGGCGCCGAGCCCACGATCACGTTCGGACCCCTCCTGGAGGGCCAGGTCGTCATGCTCACCACGCTGCCCCGGCTGCGCTCGGTGATCGACTTGTCGCCCAATCAGCCCACAGAGCAACAGCTCTCGGCATTCCAGGGCCTCATCAAGGACCTGATCAGCTTCGCCACGAACAACAACGTCCCGCCGCTCCTGCAGCAGTTTGAAAGCTGGTTCGGCATCCTGCCCCCGCAAGGCAACCTGTACGAGCTCCTGGATGGGAGGTTCACCGTGCCAATCCCGCCGAAGCCGGAAGACGGCCCGCCTGAGACCTCGTTCATCTCGGTGTCCATCTCAGGCGCGACCATCGACAGCAAGGTGGTCGCCGCCCTAACTCCGCTGCGAAAGTGGCCCGAGTAG
Genome Context
Genome Context
Tertiary structure
PDB ID
7f6ca5974137400b4054fe0cb6262c0ee30d3109dff5bd3c54b71d702f82d9f4
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50