Protein

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Genbank accession

YP_009032393.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,50

Evidence RBPdetect2

Probability 0,96

Protein sequence

MAIRLHGILVDGLNKPIVNANVFLLARSNTIVVLGGSKAVFKTDSQGAYDVTVNAGHYVVIIGPEGKEPYKAGDIVIYADSQNGSLNAYLTKWAPEETTPEILHEIKQLVANSEQFALQASESAANAKKSELNAETSKNSAATDAASALLSKQESAASASSALQSKNAAAGSATSAQQSLTAVQGLKVEVQQLKTDTQHIKEEGVAEVTALKNAATTAANNAKASETASANNATLADTKAKEASVSATTADQAKVAAEAAKDASEASAVESATSAGESQTSANAAKASETVATQKAASASTSETNAAASAQTATNKAGESAASATAAKASETNAKTSETNAGTSAGRSESAALRSEAAAERAEEIAGAIGLEDATLTVKGIVRLSNDTDSTAEDLAATPKAVKTVMDVANTKAPSNSPVLTGVPTAPTPAPEVNNNQIATTQFVHQIISALIGDAPDALNTLKELADALGDDPNFATTMTTLINSKLAKDQNGADIPNKQLFIDNVGLRETVNLALGALQKNQNGADIPDKGVFLNNINAASKTDMAAKRGMKFSRVDAPAGVEADKFYPVVIRRCSGFNSELASRVTISTDSRMSSHRMNNCDFNGFVMPGGWTDRGRYAYGMFHAYTANERAIHSIMMGDSDDDLCSVFYVEGEAFPISVYVEEGLFVVVPSADYVVGQTTYKWGATDPRTECVAAKTILDFCNGRGFYSSHALLTNADISGAKIYANGEIVARGENQVRMIGGDYGALWRNDGAMTYLLFTAKGDQYGGWNDLRPFMIDNATGEFTIGTKLNANQGVNGNASSATKLQTARKIGGASFDGTADVNLPGVNIQGNQNTTGNAATATKLQTAIKISGVSFDGSTDITLTAGHVDAFARRATGTYSDADGGVPWNSESGAYNVTRSADSYILVNFYIGVGSCRTLQMKAHHRNGGLFYRSSRDGYGFEEDWDQIYTKKNPPPAGESLPVGVPLPWPTDTPPSGYIVMQGQSFDKAAYPKLAAAYPTGVLPDMRGQTIKGKPASGRDVLSTEDDGVKSHTHTASTASVDLGSKTTSSFDYGTKTSSSFDYGTKSAASAGAHTHSLSGSTGSAGAHAHTGGLRMNSGGWDQYGSITVPASVSTVKGTNQQGAGYCAKTDSQGNHTHSLSGTAASAGAHTHNVAVGAHTHTVGIGAHTHTVALGSHSHGVTVNATGNTENTVKNVAFNYIVRAA

Physico‐chemical properties

protein length:	1211 AA
molecular weight:	125546,98740 Da
isoelectric point:	5,76640
aromaticity:	0,06028
hydropathy:	-0,30306

Domains

Domains [InterPro]

IPR013609
ATT
1–131

IPR013609 Coil IPR005068 DC_1592 DC_0310

IPR008969
ATT
5–92

IPR008969 IPR051934

DC_0465
STR
85–637

DC_0465 IPR048390 DC_1619 IPR011083 SSF88874

SSF88874
STR
964–1097

SSF88874

IPR037053
ATT
965–1018

IPR037053

YP_009032393.1

1 1211

Architecture

ATT

STR

ATT

STR

ATT

STR

ATT 1-131 | STR 132-718 | ATT 719-781 | STR 782-829 | ATT 830-1018 | STR 1019-1211

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR013609	ATT	DC_0732	1	131	InterPro cluster	Lambda-like tail fibre protein, N-terminal	N-terminal	Medium	Text match	183 proteins / 183 hits
IPR008969	ATT	IPR008969	5	92	Merged direct domain	Carboxypeptidase-like, regulatory domain superfamily	N-terminal	Low	Positional only	16 proteins / 16 hits
DC_0465	STR	DC_0465	85	637	Novel HMM	DC_0465	Central	Low	Positional only	20 proteins / 20 hits
Coil	Unmapped	-	183	203	Coils	Coil	-	-	-	-
IPR005068	STR	DC_0738	375	415	InterPro cluster	Bacteriophage lambda, Tail fiber protein, repeat-2	Central	High	Text match	217 proteins / 347 hits
DC_1592	STR	DC_1592	629	835	Novel HMM	DC_1592	Central	Low	Positional only	38 proteins / 38 hits
IPR051934	Unmapped	-	643	1211	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
IPR048390	ATT	DC_0836	719	781	InterPro cluster	Long-tail fiber proximal subunit, trimerization domain	C-terminal	Medium	Text match	656 proteins / 656 hits
DC_1619	ATT	DC_1619	830	966	Novel HMM	DC_1619	N-terminal	Low	Positional only	123 proteins / 123 hits
DC_0310	STR	DC_0310	947	1211	Novel HMM	DC_0310	Central	Low	Positional only	71 proteins / 71 hits
SSF88874	STR	SSF88874	964	1097	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	965	1018	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR011083	ATT	DC_0235	970	1017	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
SSF88874	STR	SSF88874	1106	1210	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

YP_009032393.1

1 1211

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	542	542	0,9668
Central domain	543	741	200	0,8075
C-terminal	742	1211	469	0,8724

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-542

Central
543-741

C-terminal
742-1211

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Enterobacteria phage 9g [NCBI]	1468411	Uroviricota > Caudoviricetes > Queuovirinae > Nonagvirus nv9g >
Host	Escherichia coli [NCBI]	562	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

YP_009032393.1 [NCBI]

Genbank nucleotide accession

NC_024146 [NCBI]

CDS location

range 52454 -> 56089
strand +

CDS

ATGGCAATTCGTTTACATGGTATTCTAGTTGATGGATTGAATAAACCAATCGTCAATGCAAACGTCTTCTTACTTGCACGAAGCAATACTATTGTAGTTCTAGGTGGAAGTAAAGCGGTATTTAAGACTGATTCGCAAGGTGCTTACGACGTCACAGTCAACGCCGGGCATTATGTGGTTATCATTGGACCGGAAGGTAAGGAACCGTATAAAGCGGGTGACATTGTAATCTATGCAGATAGCCAGAACGGTTCACTTAACGCATATCTTACTAAATGGGCTCCAGAAGAAACTACACCTGAAATACTTCATGAGATAAAGCAACTGGTGGCTAATTCTGAGCAATTCGCATTGCAGGCGTCTGAATCCGCTGCTAATGCTAAGAAGAGTGAGCTTAACGCGGAGACAAGTAAAAACTCTGCTGCAACGGATGCAGCGTCAGCTCTGCTATCAAAACAGGAATCTGCCGCTAGTGCGTCTTCCGCATTGCAATCCAAGAACGCTGCGGCTGGTTCTGCTACATCAGCTCAACAATCTCTTACTGCTGTGCAAGGACTCAAAGTTGAAGTCCAACAATTAAAAACCGACACGCAGCATATTAAAGAAGAGGGCGTCGCTGAAGTAACAGCTCTCAAAAATGCTGCAACTACAGCGGCTAACAATGCTAAAGCATCAGAAACTGCATCTGCTAATAATGCGACTTTGGCTGATACTAAAGCAAAGGAAGCGTCTGTAAGTGCAACCACTGCTGATCAAGCGAAAGTGGCTGCTGAGGCAGCAAAGGACGCATCCGAAGCAAGTGCGGTTGAATCTGCTACTTCTGCTGGTGAATCGCAGACCTCAGCTAATGCAGCTAAGGCAAGCGAAACGGTTGCAACACAGAAGGCAGCTTCGGCCTCTACGTCTGAAACTAATGCGGCAGCTTCCGCTCAGACTGCGACTAACAAAGCTGGTGAGTCTGCCGCTAGTGCTACCGCAGCTAAGGCAAGCGAAACTAATGCTAAGACGTCAGAAACTAATGCTGGTACATCAGCTGGAAGATCTGAGTCCGCTGCTTTGCGCTCAGAAGCTGCTGCTGAACGTGCGGAAGAGATTGCTGGTGCAATTGGTCTTGAAGATGCGACTTTGACTGTTAAAGGTATCGTTCGTCTTAGCAATGATACTGACAGCACTGCTGAAGACCTGGCGGCTACACCAAAGGCTGTTAAAACAGTCATGGACGTTGCTAATACTAAAGCTCCGTCAAATAGTCCTGTTCTAACTGGTGTACCAACGGCACCAACTCCAGCACCTGAAGTTAATAACAATCAGATTGCTACAACTCAGTTTGTACACCAAATTATAAGCGCACTTATTGGTGATGCACCAGACGCGTTAAACACTCTGAAAGAGTTAGCTGACGCTCTTGGTGATGATCCGAACTTTGCTACAACGATGACCACACTTATTAACAGTAAGTTGGCCAAAGATCAGAACGGTGCTGACATTCCTAATAAGCAACTGTTTATTGATAACGTTGGTTTACGTGAGACTGTTAACTTAGCTCTCGGTGCATTGCAGAAGAATCAGAACGGTGCGGATATACCGGATAAAGGCGTCTTCCTTAATAACATCAATGCTGCCAGCAAGACGGATATGGCCGCTAAACGTGGAATGAAGTTTTCGCGTGTAGATGCACCAGCGGGAGTTGAAGCAGACAAGTTTTATCCTGTGGTCATTCGTCGTTGTTCTGGATTCAACAGTGAATTAGCATCAAGGGTAACGATAAGTACAGATTCAAGAATGTCAAGCCATAGGATGAACAACTGTGATTTCAATGGTTTTGTGATGCCTGGTGGATGGACCGACCGCGGACGATATGCTTATGGAATGTTCCACGCATATACTGCAAATGAGCGTGCTATTCATTCTATTATGATGGGTGACTCGGATGATGATCTGTGCTCTGTGTTCTATGTTGAAGGTGAAGCGTTCCCTATCTCTGTATATGTAGAAGAAGGCTTATTTGTTGTTGTACCGTCCGCCGACTATGTTGTCGGACAAACGACTTACAAATGGGGTGCTACAGACCCTAGAACAGAATGTGTGGCCGCTAAAACTATACTTGATTTCTGCAATGGTAGAGGATTCTATAGTTCGCACGCACTCCTCACAAATGCAGATATTAGCGGTGCGAAAATCTACGCCAACGGTGAAATCGTAGCTCGCGGTGAGAATCAAGTTCGTATGATTGGTGGGGACTACGGTGCATTATGGCGCAATGACGGTGCCATGACCTATCTCTTATTTACCGCTAAAGGTGATCAATACGGTGGTTGGAACGATTTAAGACCATTTATGATTGATAACGCTACTGGTGAGTTTACCATCGGCACTAAATTGAACGCCAATCAAGGTGTGAATGGTAATGCGTCAAGTGCTACGAAGTTACAAACAGCGCGTAAAATTGGTGGCGCCTCATTCGATGGTACTGCTGACGTCAATCTTCCAGGTGTTAACATTCAGGGTAATCAGAACACAACTGGTAACGCGGCAACTGCCACCAAACTACAGACAGCAATAAAAATATCTGGTGTTTCGTTTGATGGTTCTACTGATATCACTTTAACCGCCGGGCATGTAGATGCTTTTGCCAGAAGGGCAACGGGTACATATTCCGATGCGGATGGTGGCGTTCCCTGGAATTCCGAATCAGGCGCTTACAATGTCACCCGCTCTGCCGACAGCTATATATTGGTTAACTTCTATATCGGAGTCGGAAGTTGCCGGACCCTGCAGATGAAGGCGCATCACAGAAATGGAGGTCTGTTCTACCGTTCCTCAAGAGATGGCTACGGTTTCGAAGAAGATTGGGACCAAATTTACACTAAAAAGAATCCACCTCCGGCTGGTGAAAGTTTACCTGTAGGTGTTCCATTACCGTGGCCTACGGATACACCTCCGTCCGGTTATATTGTAATGCAGGGTCAATCCTTCGATAAAGCTGCATACCCGAAACTGGCGGCTGCATACCCAACGGGCGTGCTTCCAGACATGCGTGGTCAAACTATCAAAGGTAAACCAGCAAGCGGTCGCGACGTACTTTCTACGGAAGATGACGGTGTGAAGTCACATACTCACACTGCGTCTACTGCATCTGTCGATCTTGGAAGCAAGACAACTTCCAGCTTTGACTATGGTACTAAGACAAGTTCGAGTTTTGACTATGGCACCAAATCTGCTGCTTCAGCTGGTGCGCATACGCATAGTCTGAGCGGTTCAACAGGCTCAGCTGGTGCTCATGCCCACACAGGTGGTTTAAGGATGAACAGTGGTGGTTGGGACCAATACGGATCAATAACCGTTCCGGCAAGTGTATCCACGGTTAAAGGAACCAACCAGCAGGGAGCTGGTTATTGTGCGAAAACAGACAGTCAGGGCAACCACACTCACTCTTTATCTGGTACTGCTGCTTCGGCTGGAGCTCATACACATAACGTGGCCGTTGGTGCTCATACGCATACTGTAGGTATTGGTGCTCATACCCATACAGTCGCTTTAGGTTCACATAGCCACGGTGTTACAGTTAACGCAACTGGTAACACGGAGAACACCGTTAAGAACGTTGCATTCAACTATATTGTGAGGGCTGCTTAA

Genome Context

Tertiary structure

PDB ID

9d090f54f02dee77ec0da836a47331c89f6d9a88a6e92e770c59d4cede125828

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,5191

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
The genomic sequence of a novel Enterobacteria bacteriophage 9g containing a complete queosine synthesis operon	Kulikov,E.E., Golomidova,A.K. and Letarov,A.V.	2014-12-19	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature