Protein

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Genbank accession
AFK66649.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,78
Protein sequence
MSKPERALFQPSRQPRTKERVSLYKNDNNQNVVWGSESNANFIDVLSVAPIGGIDSLHINETDIESDEFPSSTVSYHNGDNTYIPWDGGFQYVERTYALGKQAKVRDDETNSVTTFNRDVSSKGVHGVRVNFNTGAFTHRDKKNRRRIAEAFFVLSLLNESGQVVSSVSSTKHNKFFASNPTSVQLSLVVPEAYRDTIWTYKVTMSIKGHYYGTQVAGNWSAATATELYQDTHDYKNVAVCSGKIVAGEVGSKTPKRQYLVRGYKVLTPMFQDVNGKQVFTGNFDRNTSDSYAWNIMAVLTDTKWGAGNPLDKINISSFLAFDEYCSELINGVKRYSHSQYLIKQDNYFKLASQMAGAADGKLYEDTSGRIGILVDKKSVSRRVVTSYDVLDEKIKRTTVPESKKINYVEGEFDDKTNKYKKTILDVSDQNAITKNGLISKKIKLDGCTDPKEAYRVINRLLVTSQVATSSYVLAVGHTHEDAQIGDILEVYDRKYARANYCGKVGTGSTTSVIQVDKRTAIDLSMMSSPAFVVDNNRGEPIVVNISSWTEFTITLQSPINLAEIPPFTSFGVKDLSANGLKPTLMKVVGTDDKEGAISLECVEYNHSLYDHVDNGTPLVITTGSYIPPSTQSSIGNLVINNLPNSIRATWDALPSFSYSYYWKRYGENDPSSGMVVKSGDIASGFNTVSLDYPLDPVVYKIFLTAKNGDELTDTATALIDLAITDIGNSTLAQASGLGVKADDGTSSGEYDHRYFTVVWTHTDTDVKGFTIKVSQDGTTFEKYVDGNVKELYVSESDLIGTFGIAFKRQFILSVITVDKQLLTTLPVVRTVNNPPPVAPTVSVAITGDISLVGTPPDDAVGSIALVWVGNVELEVPLNALVHQTEDIYDITLPDGTVIYNGDTYAYKVAWYDSFGTEGLNYGKQTFEANPDLMVPVAPELTESFSIRDTMVKIDFTHDGTWLRKMKVYIRVLGETTPFIESAEVLLIPVDVNETTYGYDAATGEGYFFIDGLSSNREYEFYCTVANEASSYSADSNIIEARGLLAIDLDKILDDVDSAFGGIDPRELIAEGIIDAFDDLDLEESVIRETIERNVEDGKMIADITRLQAVSDTENSKTLARHTDLIVLVANEKEASATRVELLETEFETEKTKTSASISTVTKAISDETSARALQVDTLETSFNNKDTTTNSRITTLESSISDPNSASAQRITTLEASVDDEVAKRKAEIIRVEKVITDETSARATDVETLEASITGVEEDVASVLSSSTAAIGWCGFNSVQSSHETKGSCEAAGGVWTATPFAEAVRRVQVTSGADTATVGSMYTAFVDLDGKITGKATVGVNVNNEFTGLEIVGGSSISKMIFKGNVVEFKDTAGTVQLSYANGTWKFAGHLTANTGTIAGWNINTDAIYAGTYKSTDGYSIDGITLSKTGALRAKNFRIDLDGSAYFRGDIDGSNITGGTIIGTKVEAVSGTNGAGTHRAVFAVAGGFTGLGPSQGSFGVHAESSPDGWVSYGVYAVTKGEVGTRNAVRGISPAGGSAFYAEGAGTSYSPFTGSHEGLLAIGCNDFEQGDIICDVSLFNINDISNAICVMGISTKPNQKNARGVYIHKNKLDSKNIAGLDNEEETAMLSLVYDNVAFNSLGEGAMNICGENGDLESGDLIATSSMMGKGMRQDGDIITNRTVAEVRHDVTFDSPDQVKQVAVIYRCG
Physico‐chemical
properties
protein length:1710 AA
molecular weight: 185423,42790 Da
isoelectric point:4,82918
aromaticity:0,08480
hydropathy:-0,23848

Domains

Domains [InterPro]
DC_0016
STR
3–690
DC_0016 DC_1281
IPR053171
Unmapped
37–671
IPR053171 DC_0738
IPR032876
ATT
385–494
IPR032876
AFK66649.1
1 1710
Architecture
STR
ATT
STR
RBD
STR
STR 3-384 | ATT 385-494 | STR 495-690 | RBD 897-1218 | STR 1219-1294 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFK66649.1
1 1710
Domain Start End Length (AA) Confidence
N-terminal 1 1402 1402 0,8106
Central domain 1403 1601 200 0,6371
C-terminal 1602 1710 108 0,8299
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1402
Central
1403-1601
C-terminal
1602-1710

Taxonomy

  Name Taxonomy ID Lineage
Phage Colwellia phage 9A
[NCBI] 		765765 Uroviricota > Caudoviricetes > Franklinbayvirus >
Host Colwellia
[NCBI] 		28228 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Colwelliaceae >
Host Colwellia psychrerythraea 34H
[NCBI] 		167879 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Colwelliaceae > Colwellia

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
726e8a434d5ded1c0a1fd06b0b2e232ab96fd14b67b50bbf0106f1fa26507035
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6592
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50