Protein

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UniProt accession
A0A8S5N116 [UniProt]
Protein name
Chondroitinase B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDDLDLIFENIVPWNGEVDTGRDARLKLDRNFARIKNNFEAFADGLFINLGGIPEDEFDNITKPGYYLYAIQAGSGEIKGILVVSKDGFIRQIRYEFNGMYIRSFTDEGWEEWEDQFVLKLRKHIDNDSIYWDGNKRVIKSKGGGGSEIFTITVDADETSGVRGEILPAKVNKVQQGDSLTITIVPKTGFVVQRVNVDKVSQGAITEYTFRNVQEDHTMYVWFQAEVAANPTDWLERSDLPGTYYSSLQAAFDALKADYPEKLTKDITITCVKDGIRFKRDRNLWLAEIINWNKGSMFTLTVDGANKLTLDCASVGGLNFDHVDNIIVKNTAFVNVANYMESSAPEEVSGVNFTGNVESYSRNLYVADCTINGLSPVNKNGLGRYAIIGKYAENMYVNGCRITEFNCIPLKFMDCRIVSLIKSYIDASHSYGLIGHPALCTMSNSQILIAEDNEFTGTSGEYFFYLTNVEHIFFRRNYFHDGNGEGIKIASKVPVKEFVLESNLFVHLLNQPVVTWGYHYVIFECDAEHVSMLGNTAYINSTWWQQWFMKAQNHHIDTFDSYNNIIISAVADSVPMRGVSLGTVGTINSGNNLYQVPLNSSGNPVHGFFGTDDIRGSLSSMQEKGIEIGSNLANTGVKLLQVQNGGSSYKLLDVLAGTYPADVSHLPDIDYEYKAKAATGNTVGCYNLAGTIIDETNDAATGYVGVDISENTSFSNEVQYTTYADGLLLVKHNTLNRSKFVKVSAIGTQHSALILGRYGLLQLLPVLDNNGEYVSEELYDINIE
Physico‐chemical
properties
protein length:784 AA
molecular weight: 87325,00650 Da
isoelectric point:4,91108
aromaticity:0,11097
hydropathy:-0,19656

Domains

Domains [InterPro]
DC_1190
STR
14–260
DC_1190 IPR011050
cd19958
STR
58–114
cd19958
A0A8S5N116
1 784
Architecture
STR
STR 14-553 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5N116
1 784
Domain Start End Length (AA) Confidence
N-terminal 1 246 246 0,9733
Central domain 247 614 369 0,9851
C-terminal 615 784 169 0,6358
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-246
Central
247-614
C-terminal
615-784

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctXQq5
[NCBI] 		2826368 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD88168.1 [NCBI]
Genbank nucleotide accession
BK015037 [NCBI]
CDS location
range 6048 -> 8402
strand -
CDS
ATGGATGATTTGGATTTGATTTTTGAAAATATTGTCCCTTGGAATGGTGAAGTAGATACCGGTAGGGATGCACGGTTGAAACTGGATCGCAACTTTGCACGAATAAAGAATAACTTTGAGGCATTTGCTGATGGTTTATTTATTAACCTTGGTGGTATTCCTGAAGATGAGTTTGATAATATAACGAAGCCGGGGTATTATCTGTATGCTATACAGGCGGGTAGCGGAGAAATTAAAGGAATCTTGGTTGTCAGTAAGGACGGCTTCATTCGGCAGATACGCTATGAGTTCAATGGTATGTATATCCGTTCGTTTACGGATGAAGGCTGGGAAGAATGGGAGGATCAATTTGTTTTAAAGTTGAGAAAGCATATAGATAATGATTCGATTTATTGGGATGGAAACAAAAGGGTCATTAAGTCTAAAGGTGGTGGCGGAAGCGAAATATTCACTATTACGGTGGATGCGGATGAGACGTCAGGAGTGCGCGGTGAAATTCTTCCGGCTAAGGTTAATAAGGTTCAACAGGGAGATTCGTTGACTATTACGATTGTGCCCAAAACAGGGTTTGTGGTGCAGCGGGTTAACGTTGATAAAGTATCACAGGGGGCAATTACGGAATATACATTTAGAAATGTGCAGGAAGACCACACCATGTATGTATGGTTTCAGGCGGAGGTGGCTGCTAATCCTACTGATTGGCTTGAACGAAGTGACTTGCCGGGTACTTATTATTCTTCCTTACAAGCGGCATTTGATGCGCTCAAGGCGGATTATCCGGAGAAATTGACGAAGGATATTACTATAACCTGTGTTAAGGATGGCATCAGATTCAAGCGGGACAGAAACTTATGGCTGGCGGAAATTATAAACTGGAATAAGGGTTCAATGTTTACTTTGACGGTTGACGGGGCAAATAAACTGACACTGGATTGTGCATCGGTCGGTGGTCTGAACTTTGACCATGTGGATAATATCATAGTCAAGAATACGGCATTCGTGAATGTGGCGAATTACATGGAATCAAGTGCTCCGGAAGAAGTGTCAGGGGTGAATTTTACCGGAAATGTGGAAAGTTATTCACGTAACCTTTATGTCGCTGATTGTACAATCAATGGTTTATCTCCTGTGAATAAGAACGGTTTGGGACGTTATGCGATAATTGGCAAGTACGCGGAGAATATGTATGTCAATGGGTGCCGTATTACGGAATTCAATTGTATTCCGCTGAAATTTATGGATTGCCGGATAGTATCGCTTATTAAGAGTTACATTGATGCAAGCCATTCGTATGGTCTTATTGGTCATCCGGCCTTGTGCACAATGTCCAACTCGCAGATTTTGATTGCCGAGGATAACGAGTTTACCGGAACTTCCGGTGAATACTTCTTCTACCTTACGAATGTGGAGCACATTTTCTTCAGGAGGAATTATTTTCATGACGGTAATGGTGAGGGAATTAAAATTGCAAGCAAGGTGCCTGTGAAGGAGTTTGTACTGGAATCAAACCTTTTCGTACATCTGCTTAATCAACCTGTTGTGACATGGGGATATCACTATGTCATATTTGAATGCGATGCAGAGCATGTAAGTATGCTTGGCAATACAGCGTACATCAATAGTACATGGTGGCAGCAGTGGTTCATGAAAGCACAGAATCACCATATAGACACGTTTGATTCTTACAATAACATTATCATTTCGGCCGTTGCCGACAGTGTGCCAATGAGAGGTGTATCTTTAGGGACGGTTGGCACTATCAATAGTGGAAATAATCTTTACCAAGTACCGTTGAACAGTTCCGGAAATCCCGTACATGGTTTCTTTGGCACAGATGATATACGCGGCAGCTTATCCTCGATGCAAGAAAAGGGCATAGAGATAGGCAGTAACTTGGCTAATACCGGAGTTAAGTTGTTGCAAGTTCAGAATGGCGGTTCATCATACAAGCTGCTGGATGTATTGGCGGGAACTTATCCGGCTGATGTCAGCCATCTGCCGGATATTGACTACGAATATAAGGCAAAAGCGGCAACGGGTAATACGGTGGGTTGTTATAATCTTGCCGGAACGATAATTGACGAAACGAATGATGCCGCGACCGGATATGTGGGCGTAGATATTTCGGAAAATACAAGTTTCTCCAATGAGGTACAATATACCACTTATGCAGATGGTTTGTTGTTGGTAAAACACAATACGCTAAACAGGTCTAAGTTTGTGAAGGTTTCCGCTATTGGTACACAGCATTCAGCATTGATTCTGGGACGGTATGGCTTGTTGCAATTGTTACCTGTGTTGGATAATAACGGAGAATATGTTTCTGAGGAATTGTATGATATTAATATAGAGTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
97fe8b4d950669b0e98d76218201d2c51557fc8af07d74a8a597881ce8873c25
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8103
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50