Protein

View in Explore
Genbank accession
YP_009820711.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MAMKKFSELVSSVTTRIASRDNPTGLKASDLGAYSTAEFNAEMEKYIDIGVTDIEQVGDQSYFPLAIEGSADGAISLNDRYRRYGVCRESDGTIVLLRSATNSVKKGVYYVICKTDQNGQITEVIPTSRRYEPATLDRIPTAIYCHQNGIMLGQAAFEDGSSPKMFIALTDGTFDASKHVAMYLDGSLANFVDTSPNVCCWEINGKIYIAIAGTNSYKLYLNVYTVTKSSIGPSGGSVAATQLTNISGRTIEGTAISNSAEMIVCNRITANDFPSDGIGQIVWRAQIRLLAATKGTKARILIASAWWTNNRNNKNKNGLHQFYLDFETANNSYSMNPGAGQSTYTSTSSGIDWIGPSNTTEGTSAYNDGFWQWGSGNGTGNIEINERGQVALIQNDNLSAPQARSYTINGFSGNVFDELAKLGPTGGRQYDSNWKSVGDRVVGALASHGYLGFFSKNKVFVNSRTAGGQGNFEARLVTYDWNLNYHYQGEGINVYGFPPSNNVVVRTGQMSLPFLTVHLSDDNTVVSGSYLTDAVLTSKIGYDATKLAPSGEAISITAANLQAGGQLVWNAYTGSKLSGVSQWRHALAVPPDGTNAPCILFVAGCNTSTRVHGRIAAEVTVSARKGAITVTGVTKLLGYVEEPDSTNIGSQDAAWGVLAYKKVSDGWLVAGHVPYSRQSAGNQNTYQFRAGRQNDGNWTTIAFEGMYAYLQTSGYRWNVHPVWGIGYVDTAVSTVMGNGGQVFNAVGNSVAEYKALAVKNRYMVSTVVAASGYDIYINEDITCLFAGKVMTLPKGHYNLKDYNSSPGNKTWYVSVVPNGNQLELELTIYKQEDDKGQRVNIGTITTSDTQISVINLNKTTKLGTVTL
Physico‐chemical
properties
protein length:867 AA
molecular weight: 93634,47710 Da
isoelectric point:6,83895
aromaticity:0,09804
hydropathy:-0,24164

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009820711.1
1 867
Domain Start End Length (AA) Confidence
N-terminal 1 52 52 0,9747
Central domain 53 281 230 0,8062
C-terminal 282 867 585 0,5553
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-52
Central
53-281
C-terminal
282-867

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_Goslar
[NCBI] 		2502409 Uroviricota > Caudoviricetes > Chimalliviridae > Goslarvirus goslar >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009820711.1 [NCBI]
Genbank nucleotide accession
NC_048170 [NCBI]
CDS location
range 20524 -> 23127
strand -
CDS
ATGGCAATGAAAAAGTTCAGCGAACTGGTGAGTAGCGTTACTACGCGTATCGCCAGTCGCGACAACCCAACGGGACTAAAAGCGAGTGATCTTGGGGCCTACAGTACCGCTGAGTTCAACGCCGAGATGGAAAAATACATCGATATTGGCGTAACCGATATCGAACAGGTTGGGGACCAAAGTTATTTTCCTCTGGCAATTGAAGGCTCCGCTGATGGTGCTATCTCCCTAAACGACAGATACCGTCGTTACGGCGTATGTCGTGAATCGGACGGTACCATCGTGTTATTGCGTTCAGCAACAAACAGCGTAAAGAAAGGGGTTTACTACGTTATCTGTAAAACAGATCAAAACGGGCAAATCACCGAAGTTATCCCAACCAGTCGTCGTTATGAACCCGCGACGCTCGACCGTATTCCTACGGCGATATACTGTCACCAGAACGGTATCATGTTAGGTCAAGCTGCTTTTGAAGACGGTAGCAGCCCTAAAATGTTTATCGCATTGACAGACGGAACGTTTGATGCATCCAAACACGTCGCCATGTATCTCGATGGTAGTCTTGCCAACTTTGTTGATACGTCACCGAATGTCTGCTGTTGGGAAATTAACGGTAAAATCTACATCGCTATTGCTGGCACTAACAGTTATAAACTCTACTTAAATGTTTATACCGTAACTAAATCTTCCATCGGTCCCAGCGGTGGCAGCGTAGCAGCTACACAGCTTACGAATATTAGCGGTAGAACGATAGAAGGAACGGCAATAAGCAACAGCGCCGAGATGATTGTCTGCAACCGCATAACTGCGAACGATTTCCCTTCTGACGGGATCGGTCAAATCGTCTGGCGTGCCCAGATTCGTCTGCTTGCAGCAACCAAAGGCACTAAAGCACGCATTCTGATTGCTTCGGCGTGGTGGACGAACAACCGCAATAACAAGAATAAAAATGGGCTGCATCAGTTTTATCTGGATTTCGAAACCGCCAACAACAGTTACAGCATGAACCCAGGCGCTGGACAATCGACTTACACGTCAACCAGCAGCGGTATTGACTGGATAGGACCTTCCAACACAACGGAGGGGACAAGTGCATATAACGATGGTTTCTGGCAATGGGGTTCGGGTAACGGTACCGGGAATATCGAAATCAACGAACGTGGTCAGGTAGCCCTTATCCAAAACGACAACTTATCCGCCCCCCAAGCGAGATCGTACACCATCAATGGTTTCTCTGGAAACGTGTTCGACGAACTCGCCAAACTCGGCCCGACCGGTGGAAGACAGTACGATTCAAACTGGAAAAGCGTCGGGGATCGCGTCGTTGGTGCACTCGCGTCCCATGGTTACCTGGGTTTCTTTTCTAAGAACAAGGTTTTTGTTAACTCGCGTACGGCTGGCGGACAGGGTAATTTTGAGGCTCGTCTAGTGACCTATGACTGGAACCTCAATTACCATTATCAGGGCGAGGGTATTAATGTTTACGGTTTTCCGCCTTCCAACAACGTGGTGGTTAGAACGGGTCAAATGTCGTTACCTTTCCTAACCGTGCATTTAAGCGATGACAATACGGTGGTTAGCGGGTCTTATTTAACCGATGCGGTCCTAACAAGCAAAATCGGTTACGATGCAACCAAACTTGCACCATCCGGTGAAGCCATCAGCATAACCGCAGCGAATCTGCAGGCAGGCGGTCAGCTTGTGTGGAACGCATATACAGGATCTAAGTTATCAGGGGTAAGTCAGTGGCGACATGCGTTAGCAGTGCCTCCAGATGGTACAAACGCACCCTGTATCCTGTTTGTTGCTGGCTGTAATACCAGCACACGCGTACATGGACGAATCGCTGCAGAGGTTACCGTATCCGCGCGTAAAGGCGCTATTACGGTGACGGGCGTAACCAAATTGCTGGGTTATGTCGAAGAACCCGATTCAACAAATATCGGTAGTCAGGATGCTGCCTGGGGTGTATTAGCTTACAAGAAGGTTAGTGATGGATGGCTTGTTGCGGGACATGTTCCGTACTCCCGTCAGTCTGCAGGGAACCAGAACACCTATCAGTTCCGAGCTGGACGACAAAACGATGGGAACTGGACAACCATCGCATTTGAAGGTATGTATGCTTACCTACAGACAAGCGGCTATCGCTGGAACGTGCATCCGGTGTGGGGAATCGGTTATGTTGATACCGCAGTCTCTACGGTGATGGGTAATGGCGGGCAGGTCTTTAACGCTGTCGGTAATTCCGTTGCGGAATATAAAGCTCTCGCTGTTAAAAACCGTTACATGGTTTCTACGGTCGTTGCTGCTTCCGGTTACGATATCTACATCAACGAAGACATCACTTGCTTGTTTGCCGGTAAGGTCATGACCTTACCTAAAGGCCATTATAACCTAAAAGACTATAATAGTTCACCAGGTAATAAAACATGGTACGTTTCCGTTGTTCCTAATGGTAATCAGTTAGAGCTGGAGTTAACCATCTACAAGCAAGAAGATGATAAAGGACAGCGCGTTAATATCGGAACGATTACGACCAGCGATACCCAGATCTCTGTCATTAATCTCAATAAGACAACCAAATTAGGTACAGTCACGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f0a1910d982ec546837fff8d21765097f36a50b340d2c5613b9f1713d2dae70c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3942
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank