Protein

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Genbank accession
WCD44270.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSFHGDLTILQGIHSVQAWEVADAAARAAVVPGPADVGKILRQLDTDSFYLLEDSGPAKWNNLSATPDTSFIIPVACSDEFTPLAIAPGQVTFVWPEALNILAVHASLTTAQGSGGLVTVDANIAGVSIFTTRLTIDNGEFSTGTATTPAVLNATPKPLAAFAKLSIDVDVVGSGEAAGLKLYFKVQKQ
Physico‐chemical
properties
protein length:189 AA
molecular weight: 19637,03700 Da
isoelectric point:4,60978
aromaticity:0,07407
hydropathy:0,30370

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Polaromonas phage Tiera
[NCBI] 		3017787 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Polaromonas sp.
[NCBI] 		1869339 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCD44270.1 [NCBI]
Genbank nucleotide accession
OQ067478 [NCBI]
CDS location
range 9072 -> 9641
strand +
CDS
ATGAGCTTTCATGGCGATCTAACAATCTTACAGGGTATTCACTCTGTCCAAGCCTGGGAAGTAGCTGATGCTGCCGCCCGGGCTGCTGTCGTTCCAGGGCCTGCTGATGTAGGTAAAATCCTGAGGCAGCTTGATACGGATTCTTTTTATCTGCTAGAGGATTCTGGTCCTGCAAAATGGAATAATCTCTCTGCTACTCCAGATACCAGTTTCATTATTCCAGTAGCTTGCTCTGATGAATTTACTCCTTTGGCAATAGCTCCTGGACAAGTCACATTCGTTTGGCCGGAAGCTCTGAACATTTTGGCAGTCCATGCTTCCCTCACAACTGCGCAAGGTTCAGGAGGTCTTGTCACAGTAGATGCAAATATTGCAGGTGTTAGCATCTTTACCACGCGTCTTACTATTGATAATGGTGAATTTAGTACAGGCACAGCTACCACCCCTGCTGTTCTCAATGCTACTCCTAAACCTTTGGCAGCCTTTGCTAAACTATCAATAGATGTAGATGTTGTAGGAAGTGGAGAAGCTGCTGGGTTGAAACTCTATTTCAAGGTGCAAAAACAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7113a861a736254715fe4b7a5ff353874e625162f425a8af536ee4bfae84ef9f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8551
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three Phages from a Boreal Lake during Ice Cover Infecting Xylophilus, Caulobacter, and Polaromonas Species Laanto,E. and Oksanen,H.M. 2023 — GenBank